Click here to switch to the map view.

The map label for this gene is 109946678

Identifier: 109946678

GI number: 109946678

Start: 43392

End: 43805

Strand: Direct

Name: 109946678

Synonym: Hac_0044

Alternate gene names: NA

Gene position: 43392-43805 (Clockwise)

Preceding gene: 109946676

Following gene: 109946679

Centisome position: 2.79

GC content: 35.51

Gene sequence:

>414_bases
ATGAATATTTTATTTGGGATTAGTGACACGCAAGAATGTTATAACGCCATTAAGTTCGCTATCAAGTTCGCCCATTCGCT
TAAAGAGGTTCGTTTTACTTTGTTGCATGTGAGCATGGAAGTGTTTATTTATAGCGAAAGTGGGATGATGGATTATGGCC
AAACAGAAGCTTTAGAAGAAGAAAAAGCTAAAATTTTATTAAAGCAATTTGAAGACGCTTTCAAAAAGGAAAATATAGAA
TGCGAGAGCGTTTTAAAAAGTGGTGATTTAGTGGATGTGGTTTTAGAGATGGAGAAGGATTATGATTTGTTGTTGATCGG
AGCGAGTGAGTCTAATTTGTTGTATCGTTTGTTTAGTTCAAACCAAAACCGTTTGGTTGAGCAATCTAGTATCTCTGTAA
TGATCGCCAAATAG

Upstream 100 bases:

>100_bases
CCTTTTTAATGCTTTATTATTGGGATTGTAGCGCTTTAAACTTCAGCGGTAATTAGGGTTTATTTGCTATAATATCAAAA
CTTCATGTAAGGTTGGTCTT

Downstream 100 bases:

>100_bases
CATGAAAATCTATAAAATACCCATCCCCACCATGTCAGGAGTGATCATGCTCAATGACCCTGTTACGAAAGCTGAGTTTG
TGATCTCTACTTTGAGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: USP Jhp_0027 [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNILFGISDTQECYNAIKFAIKFAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKILLKQFEDAFKKENIE
CESVLKSGDLVDVVLEMEKDYDLLLIGASESNLLYRLFSSNQNRLVEQSSISVMIAK

Sequences:

>Translated_137_residues
MNILFGISDTQECYNAIKFAIKFAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKILLKQFEDAFKKENIE
CESVLKSGDLVDVVLEMEKDYDLLLIGASESNLLYRLFSSNQNRLVEQSSISVMIAK
>Mature_137_residues
MNILFGISDTQECYNAIKFAIKFAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKILLKQFEDAFKKENIE
CESVLKSGDLVDVVLEMEKDYDLLLIGASESNLLYRLFSSNQNRLVEQSSISVMIAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15678; Mature: 15678

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFGISDTQECYNAIKFAIKFAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHH
EKAKILLKQFEDAFKKENIECESVLKSGDLVDVVLEMEKDYDLLLIGASESNLLYRLFSS
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECC
NQNRLVEQSSISVMIAK
CCCCEEECCCEEEEEEC
>Mature Secondary Structure
MNILFGISDTQECYNAIKFAIKFAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHH
EKAKILLKQFEDAFKKENIECESVLKSGDLVDVVLEMEKDYDLLLIGASESNLLYRLFSS
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECC
NQNRLVEQSSISVMIAK
CCCCEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]