| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is ECO57IR fragment 2
Identifier: 109946651
GI number: 109946651
Start: 13240
End: 15798
Strand: Direct
Name: ECO57IR fragment 2
Synonym: Hac_0012
Alternate gene names: NA
Gene position: 13240-15798 (Clockwise)
Preceding gene: 109946650
Following gene: 109946663
Centisome position: 0.85
GC content: 39.19
Gene sequence:
>2559_bases TTGCATGCTTATGACTTCACCACCACCCCTAAAGACATCAAGCAAGGAGTGAAGCAAAACCACGACACGCTGATCAATTC AGCCGTGCTCGGGCTTGTTTTTGAAAAACTTAACGGCTATAAAGAGGGGAGTTTTTATACCCCAAGCCTTATCACAAGCT ACATGTGCAAAGAGAGTATCACATCAATTGTGTTGGATAAATTCAATCAAACCTATCAAATAAAGTGTGAAGATTTAACA GAATTACAAAATTATCTAAAAGATAGCTACAAAGAGGATAAACACAAAGAATACCTGAACACGCTTTTAACCTTACGCAT TTGCGATCCGGCGGTGGGGAGTGGGCATTTTTTAGTCTCTGCACTCAATGAAATGGTATGGATTGCTTACGATCTAGGGC TTATCACTTCTTTGTATCGCTGCGATCTCATATTGGAAAACGATGAAATCATCATCCGCACGCCAAAGGGCGGGATCTTT AACTACACAATGCCAGAGATTGAAAACGACGATCACCACCAAATCCAAAAAGAACTCTTTGAGCTTAAGAAATCCATCAT TGAAAACTGCCTTTTTGGCGTGGATATTAACCCCAACTCTTGCGAAATCACCAAGCTCAGATTATGGATAGAGCTTTTAA AATACAGCTACTATATTTTTGATGAAAAAGGTAACACCCAAGCGCTTGAAACCCTCCCCAACATTGATATTAATATCAAA TGCGGTAACAGCTTGATTTCACGCTTTAGTTTGAATGACGATCTCAAAAAGATTCCTAATATCAAGAAAAAAGTCCAAGA ATACAAAGATCTAGTCGCCCAATACAAAGACCCAAACCCTCTCTATCCCTTCAATAAAGCAGATCTTATTAACAAAATCT CAGACTTAAAAAACACTTTTTCGCTCACGCTCAAAGACCCTAAAACTAAAACAGAGCTTGAAAAGGCTATTGAAAAACAC ATTAACAATTACAATGATTTTGCCCTAGATGATAAGAGTTTGCTGGATGGCTTAAGTTATTTTATCCCAAATATTTTTGG CACGCCTGAACTAAGCCCTGAAAAACAGGAAGAGGCTTTTGCTTCTTATGGGCGTATTAGAACTTTGAGAAAAAGGCTTG ATGACGCCTTAAGTGGTAGGGAGTATCAAAATGCGTTTGAATGGCGCTTTGAATTCCCTGAAGTGCTGGATGATGAGGGG AATTTTTTAGGCTTTGATTGCATCATGGGCAACCCGCCTTATATCCGCCAAGAAAAAATCAAAGACTTAAAACCTTTATT AGAAAAGCAATACCAAAATTTCTATAACAGCTCCGCTGACATTTACACCTACTTTTTTGCCCTAGCTTCCAATCTTTTAA AAGAAAAGGGGTTTAACGCTTTCATCACTTCTAACAAATACACACGCGCTAAATACGGCGCTAAATTAAGAGAGTTTTTA CTCAAAAACACCACCATTATTAGCTACATGGAATTGAGTGCCTTAAAAGTCTTTGAAAGCGCTACAGTGGATACAAGCAT CATCAATTCCATCAAACAAGTGCCCCTTAAAGAGAGCCGCTTTAAATATTACGAACCCACCCCAAACGATAAAAACGATT TGAAAAACACCCACCCCCTACTTATGAGACAAAACGCGCTCAAAACAGAAAGCTTTATTTTTGCCAACACCAAGCTTTTA GATTTAAGGGATAAAATAGAACAAAACGGTACCCCGCTTAAAGACTGGGGTATTCAAATCAATTACGGGATAAAAACCGG CTGCAACGAAGCCTTTATCATTCCCACTGAAAAAAGAGACGAAATCTTAAAAAATTGCGATGATTCGCAAAAAGATGGCA TGGGAATGAGCGAAAGAGAAAGAACTCAAAAGCTTATCAAACCCGTTTTAAGAGGGAGAAATATTAAGCGGTATCGTTAT GAGTGGGCGGGGGAGTGGCTGATTAACACCCATAATGGCTATACTTCTTTTTCTAATCATAAAATCCCTCCAATAGATAT AGAAAAATACCCCACGCTCAAAGCGCATTTAGACTCTCATTGGGACGCTATTGCAACACGATCCGATCAAGGAGACACCC CCTACCATCTCAGGAATTGCGCGTATATTGAAGAGTTTGAAAAAGAAAAAATTGTGTATGGCGAGATCGTGCAAGAGCCA CGATTTTATTTAGATAATGGATCATGTGAGTTAGGATATTGTTATGCAGAAGCCACGAGCTTTATTCTCACAGGAGAGCA TTTACACTATCTTTTAGGAATGTTGCATTCTAAATTGATTACTTTTGCTTTCAAAACTTTCTACGCAGGCGGTGGACTAG GTGAGAGTGGTTATCGCTATAAAAAGGCTTTTTTAGAACGGCTCCCCATTCCCCAAATCACCCAACAAAACCAAGAATCA GCCCAAAAAATCGCCGATTGCACAGAGCAGATCTTACAAACAAAAGAGAAAGACCCCAAAGCCAACACTCAGGAATTAGA GCAAGAAATTGACGCCTTAGTCTATCAGCTCTACAACCTCACCGATGAAGAGATTCAAACCATTGAAAATGGGCAATAA
Upstream 100 bases:
>100_bases CAAATTGCTCAATAACAATTCCTTAGAGCTTTATCCCCAATCCATTCTCAAAAAAGACGACAAAAAATCTTTGCCCTTGC TGGAATACCTTTTTGCATTT
Downstream 100 bases:
>100_bases ATGGCAATAAATAACAAGCGATTGACCCTAAAGGAAAACCCCTACTTTTTAAGCAGAGGAAACCTTTGGCTTAATGGGTT TTTTTAACCACTGTTTTAAC
Product: type II DNA modification enzyme (methyltransferase) fragment 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MHAYDFTTTPKDIKQGVKQNHDTLINSAVLGLVFEKLNGYKEGSFYTPSLITSYMCKESITSIVLDKFNQTYQIKCEDLT ELQNYLKDSYKEDKHKEYLNTLLTLRICDPAVGSGHFLVSALNEMVWIAYDLGLITSLYRCDLILENDEIIIRTPKGGIF NYTMPEIENDDHHQIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFDEKGNTQALETLPNIDINIK CGNSLISRFSLNDDLKKIPNIKKKVQEYKDLVAQYKDPNPLYPFNKADLINKISDLKNTFSLTLKDPKTKTELEKAIEKH INNYNDFALDDKSLLDGLSYFIPNIFGTPELSPEKQEEAFASYGRIRTLRKRLDDALSGREYQNAFEWRFEFPEVLDDEG NFLGFDCIMGNPPYIRQEKIKDLKPLLEKQYQNFYNSSADIYTYFFALASNLLKEKGFNAFITSNKYTRAKYGAKLREFL LKNTTIISYMELSALKVFESATVDTSIINSIKQVPLKESRFKYYEPTPNDKNDLKNTHPLLMRQNALKTESFIFANTKLL DLRDKIEQNGTPLKDWGIQINYGIKTGCNEAFIIPTEKRDEILKNCDDSQKDGMGMSERERTQKLIKPVLRGRNIKRYRY EWAGEWLINTHNGYTSFSNHKIPPIDIEKYPTLKAHLDSHWDAIATRSDQGDTPYHLRNCAYIEEFEKEKIVYGEIVQEP RFYLDNGSCELGYCYAEATSFILTGEHLHYLLGMLHSKLITFAFKTFYAGGGLGESGYRYKKAFLERLPIPQITQQNQES AQKIADCTEQILQTKEKDPKANTQELEQEIDALVYQLYNLTDEEIQTIENGQ
Sequences:
>Translated_852_residues MHAYDFTTTPKDIKQGVKQNHDTLINSAVLGLVFEKLNGYKEGSFYTPSLITSYMCKESITSIVLDKFNQTYQIKCEDLT ELQNYLKDSYKEDKHKEYLNTLLTLRICDPAVGSGHFLVSALNEMVWIAYDLGLITSLYRCDLILENDEIIIRTPKGGIF NYTMPEIENDDHHQIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFDEKGNTQALETLPNIDINIK CGNSLISRFSLNDDLKKIPNIKKKVQEYKDLVAQYKDPNPLYPFNKADLINKISDLKNTFSLTLKDPKTKTELEKAIEKH INNYNDFALDDKSLLDGLSYFIPNIFGTPELSPEKQEEAFASYGRIRTLRKRLDDALSGREYQNAFEWRFEFPEVLDDEG NFLGFDCIMGNPPYIRQEKIKDLKPLLEKQYQNFYNSSADIYTYFFALASNLLKEKGFNAFITSNKYTRAKYGAKLREFL LKNTTIISYMELSALKVFESATVDTSIINSIKQVPLKESRFKYYEPTPNDKNDLKNTHPLLMRQNALKTESFIFANTKLL DLRDKIEQNGTPLKDWGIQINYGIKTGCNEAFIIPTEKRDEILKNCDDSQKDGMGMSERERTQKLIKPVLRGRNIKRYRY EWAGEWLINTHNGYTSFSNHKIPPIDIEKYPTLKAHLDSHWDAIATRSDQGDTPYHLRNCAYIEEFEKEKIVYGEIVQEP RFYLDNGSCELGYCYAEATSFILTGEHLHYLLGMLHSKLITFAFKTFYAGGGLGESGYRYKKAFLERLPIPQITQQNQES AQKIADCTEQILQTKEKDPKANTQELEQEIDALVYQLYNLTDEEIQTIENGQ >Mature_852_residues MHAYDFTTTPKDIKQGVKQNHDTLINSAVLGLVFEKLNGYKEGSFYTPSLITSYMCKESITSIVLDKFNQTYQIKCEDLT ELQNYLKDSYKEDKHKEYLNTLLTLRICDPAVGSGHFLVSALNEMVWIAYDLGLITSLYRCDLILENDEIIIRTPKGGIF NYTMPEIENDDHHQIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFDEKGNTQALETLPNIDINIK CGNSLISRFSLNDDLKKIPNIKKKVQEYKDLVAQYKDPNPLYPFNKADLINKISDLKNTFSLTLKDPKTKTELEKAIEKH INNYNDFALDDKSLLDGLSYFIPNIFGTPELSPEKQEEAFASYGRIRTLRKRLDDALSGREYQNAFEWRFEFPEVLDDEG NFLGFDCIMGNPPYIRQEKIKDLKPLLEKQYQNFYNSSADIYTYFFALASNLLKEKGFNAFITSNKYTRAKYGAKLREFL LKNTTIISYMELSALKVFESATVDTSIINSIKQVPLKESRFKYYEPTPNDKNDLKNTHPLLMRQNALKTESFIFANTKLL DLRDKIEQNGTPLKDWGIQINYGIKTGCNEAFIIPTEKRDEILKNCDDSQKDGMGMSERERTQKLIKPVLRGRNIKRYRY EWAGEWLINTHNGYTSFSNHKIPPIDIEKYPTLKAHLDSHWDAIATRSDQGDTPYHLRNCAYIEEFEKEKIVYGEIVQEP RFYLDNGSCELGYCYAEATSFILTGEHLHYLLGMLHSKLITFAFKTFYAGGGLGESGYRYKKAFLERLPIPQITQQNQES AQKIADCTEQILQTKEKDPKANTQELEQEIDALVYQLYNLTDEEIQTIENGQ
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR011639 [H]
Pfam domain/function: PF07669 Eco57I; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 98736; Mature: 98736
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAYDFTTTPKDIKQGVKQNHDTLINSAVLGLVFEKLNGYKEGSFYTPSLITSYMCKESI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHH TSIVLDKFNQTYQIKCEDLTELQNYLKDSYKEDKHKEYLNTLLTLRICDPAVGSGHFLVS HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCHHHHH ALNEMVWIAYDLGLITSLYRCDLILENDEIIIRTPKGGIFNYTMPEIENDDHHQIQKELF HHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHH ELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFDEKGNTQALETLPNIDINIK HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCEEEEE CGNSLISRFSLNDDLKKIPNIKKKVQEYKDLVAQYKDPNPLYPFNKADLINKISDLKNTF ECHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHE SLTLKDPKTKTELEKAIEKHINNYNDFALDDKSLLDGLSYFIPNIFGTPELSPEKQEEAF EEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ASYGRIRTLRKRLDDALSGREYQNAFEWRFEFPEVLDDEGNFLGFDCIMGNPPYIRQEKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHH KDLKPLLEKQYQNFYNSSADIYTYFFALASNLLKEKGFNAFITSNKYTRAKYGAKLREFL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH LKNTTIISYMELSALKVFESATVDTSIINSIKQVPLKESRFKYYEPTPNDKNDLKNTHPL HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCH LMRQNALKTESFIFANTKLLDLRDKIEQNGTPLKDWGIQINYGIKTGCNEAFIIPTEKRD HHHHCCCCCCCEEEECCEEEHHHHHHHCCCCCCHHCCEEEEECCCCCCCCEEEECCCHHH EILKNCDDSQKDGMGMSERERTQKLIKPVLRGRNIKRYRYEWAGEWLINTHNGYTSFSNH HHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEEECCCCCCCCCCC KIPPIDIEKYPTLKAHLDSHWDAIATRSDQGDTPYHLRNCAYIEEFEKEKIVYGEIVQEP CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCC RFYLDNGSCELGYCYAEATSFILTGEHLHYLLGMLHSKLITFAFKTFYAGGGLGESGYRY CEEEECCCCEEEEEHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KKAFLERLPIPQITQQNQESAQKIADCTEQILQTKEKDPKANTQELEQEIDALVYQLYNL HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC TDEEIQTIENGQ CHHHHHHHCCCC >Mature Secondary Structure MHAYDFTTTPKDIKQGVKQNHDTLINSAVLGLVFEKLNGYKEGSFYTPSLITSYMCKESI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHH TSIVLDKFNQTYQIKCEDLTELQNYLKDSYKEDKHKEYLNTLLTLRICDPAVGSGHFLVS HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCHHHHH ALNEMVWIAYDLGLITSLYRCDLILENDEIIIRTPKGGIFNYTMPEIENDDHHQIQKELF HHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHH ELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFDEKGNTQALETLPNIDINIK HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCEEEEE CGNSLISRFSLNDDLKKIPNIKKKVQEYKDLVAQYKDPNPLYPFNKADLINKISDLKNTF ECHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHE SLTLKDPKTKTELEKAIEKHINNYNDFALDDKSLLDGLSYFIPNIFGTPELSPEKQEEAF EEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ASYGRIRTLRKRLDDALSGREYQNAFEWRFEFPEVLDDEGNFLGFDCIMGNPPYIRQEKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHH KDLKPLLEKQYQNFYNSSADIYTYFFALASNLLKEKGFNAFITSNKYTRAKYGAKLREFL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH LKNTTIISYMELSALKVFESATVDTSIINSIKQVPLKESRFKYYEPTPNDKNDLKNTHPL HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCH LMRQNALKTESFIFANTKLLDLRDKIEQNGTPLKDWGIQINYGIKTGCNEAFIIPTEKRD HHHHCCCCCCCEEEECCEEEHHHHHHHCCCCCCHHCCEEEEECCCCCCCCEEEECCCHHH EILKNCDDSQKDGMGMSERERTQKLIKPVLRGRNIKRYRYEWAGEWLINTHNGYTSFSNH HHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEECCCEEEECCCCCCCCCCC KIPPIDIEKYPTLKAHLDSHWDAIATRSDQGDTPYHLRNCAYIEEFEKEKIVYGEIVQEP CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCC RFYLDNGSCELGYCYAEATSFILTGEHLHYLLGMLHSKLITFAFKTFYAGGGLGESGYRY CEEEECCCCEEEEEHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH KKAFLERLPIPQITQQNQESAQKIADCTEQILQTKEKDPKANTQELEQEIDALVYQLYNL HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC TDEEIQTIENGQ CHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]