Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109899274

GI number:

Start: 3592794

End: 3595466

Strand: Direct

Name: Not Available

Synonym: Patl_2967

Alternate gene names: NA

Gene position: NA

Preceding gene: 109899273

Following gene: 109899275

Centisome position: NA

GC content: NA

Gene sequence:

>2673_bases
ATGAATCGTGAACTAATTCCTGCCTACGAAGACATCGTGACGCGTGTACAAAACAACAAATTATGGGATTTCCCCGGAGG
GGTTTTTCCTGCACAGCAAAAAGAATTATCTAATCAACAACCGATCGAAAGTATCTCACTGCCTGAACGACTGTATATTC
CGCTTAAGCAGCACATCGGAGTCGAAGGACAATTAATCGTTGCGCCAGGCGAGCAAGTACTAAAAGGCCAACCACTGACG
CGAAGTGCAAACCCATTTTCAGTGCCGGTGCATGCGCCTACTTCGGGCACGGTTGTGAGTATCGGTCCACATATTTCAGC
GCATCCGTCTGCGTTACCCGAGCAAACCCTGATCATCGAGCCCGATAATCTAGACAAATGGGCAATCTTAAGCCCATTAC
AAGATTATCAATCACTGCCCAAAGTAACAGTGCTTGAAGCGATTTGTAATGCAGGCATATCAGGGATGGGCGGTGCGGGG
TTTCCTACGCATATAAAAGCGGCACCGAAGAAAGATGTCGAGTTCATTATTATCAATGGTGTGGAGTGTGAGCCGTACAT
TACTTCTGATGACCGTTTAATGCGAGAGCACGCTTGGCAAATTCGTCAAGGTATCGATGTCTTATGCCATTTATTATCCC
CTAAGCAAGTTTACATTGCGATTGAAGACAACAAACCTGAAGCTATAGAAGCGATGCGCGTCGCGTGCCAGCAAAGCGAA
CAATATAAAGTCGTTCCTATTGCGACCAAATACCCCGCGGGTGGCGAGAAGCAACTGATCCAAGTCATCACAAACAGAGA
AGTCCCCAAACAAGGGTTGCCCATAGATGTAGGGGTGATCATGCATAATGTGGGAACTTGTTTTGCTATTGCTGATGCGA
TTTTTAGTGGCAAACCGCTAATACAACGCGTAGTCACAATTACGGGCAAGGCAGTTGAAACCCCAAAAAATGTTTGGGCG
TTGATCGGCTCCCCTGTGGCGCATTTGCTTTCCTCTGCTGGTTATGTGGCCCACAGGCAGGCGCAAAAACACATTATCAT
GGGCGGGCCTATGATGGGCTTTACCGTGGCAAGCGATCAAGTGCCCGTGGTTAAGATAACGAATTGTTTGTTACTCCCCA
CATCTGATGAAATGGCTGAGCCTGAAGCGGAACAACCTTGTATTCGCTGCAGCGCGTGTGCTGATGCGTGCCCTGTATCC
CTGTTACCACAACAGTTATTCTGGCACAGCAAAGCCAAAGAGTTAGACAAAGCCCAAGATTACAATTTGTTTGATTGCAT
AGAATGCGGCGCTTGTGCGTATGTATGCCCCAGCGAAATTCCATTAGTACATTATTACCGCGTAGCAAAAGCCGAAATTC
GAGTAGAGCAAGAAGAGAAGCAAAAATCAGACAAAGCGAGAGAGCGCTTTGAAAGCCGAGCTGCACGTTTGGTGCGAGAA
CAAGAAGCCCGAGATGAAAAGCATCGCAAAGCAGCCGAAGCGCGCAAGTCAGCCATGCAAAATAAAGGCAATGACGCTCA
AGATAAAATCGCCGCTGCGCTTGCGCGGGCCAAAGCTAAAAAGGCTGAGCAGGTACAAACAACGGCAAATAATCCAGATG
TCAGTTCTGAACAGGCAACACTGCCCAAAGCAGCTGAGTCCGCGACAGTGACAAGCACAGAATCAGCAACTCAAAAATCT
GGTACTTCAAAAGATGATCGCGTGGCAGCGGCTATTGCTAGAGCGAAAGCCAAGAAAGCACAGCGTTCGGCGCCGGTGGA
GGCTGATATAAGCTCTGAGCATGAAACCCAGTCCGAAGCAGCTGAGCCCGCGACAGTGACAAGCACAGAATCAGCAACTC
AAAAATCTGGTACGTCAAAAGATGATCGTGTGGCAGCGGCTATTGCTAGAGCGAAAGCCAAGAAAGCACAGCGTTCGGCG
CCGCTGGAGGCTGATACAAGCTCTGAGCATGAAACGCAGCCCAAGACAGTGGAAAACTCACAAGCAACAGGCGCAGAGAC
CGCAAGCCAAAAATCTGGTACTGCCAAAGATGAGCGCGTGGCAGCGGCTATTGCTAGAGCGAAAGCTAAAAAAGCACAAA
AATCTGCCGAAAATTTAGCTTCGAATCCCCCCAGTGAGTCAGACACCTCGCTTGATGCCCCCACTACTGCATCTGATAGC
GCTTCGATTCGTTCGTTAAATAAACCGAACGCACAAACACAGAGTAATGACGCTGTTAAGTCGAAAGACGAGCGTGTTGC
AGCCGCTATCGCCAAGGCCAAAGCTAAAAAAACGCTGAAGGAAACACAAAATGCTTCTGCCGAGAGCGGCTCGGCATCCG
GGCCAATTTCTAACCACCAAAGTGAGCCTGCTCAAGAGCCGGTAGAGAAAACACCTGAACAGTATGACGTTCAGGAGCGT
GATCCTGCTGAACAGAAAAAGGCACGAATTGCCGCTGCGGTAGCCAAAGCGAAAGCGAAAAAATTAGCTAAAGACCAAAC
GTCGGGTGAAACGCAAAGTCCGAGTGACAAACCTATTACGCCTTCACCGGAGGCTCAAGATGCTCAACAGACCCAAGAGC
CCCAGGTAACTGATGCCGAACACGCATTAGACGAGAAGAAACGCCGCATCGCTGCTGCCGTAGCGAAAGCGAAAGCTAAA
AAGGCGGCTCAAATGAAATCATCAGAAGAATAA

Upstream 100 bases:

>100_bases
ACCCCTGCCCTGTTGATTGTATTGACATGATCCCTACGCAGACCACGCCATCATCATGGCGCTGGAACATTGAAAGTATC
CCCGTTAAGCAGGTGAGCTA

Downstream 100 bases:

>100_bases
AAGCGCCAATGAATTATAAACTAGCCAGTTCACCTCATCAGCATGTGCGACGCAACACCGGTCAGGTTATGCGCATGGTG
ATTTATGCATTAATACCAGG

Product: RnfABCDGE type electron transport complex subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>890_residues
MNRELIPAYEDIVTRVQNNKLWDFPGGVFPAQQKELSNQQPIESISLPERLYIPLKQHIGVEGQLIVAPGEQVLKGQPLT
RSANPFSVPVHAPTSGTVVSIGPHISAHPSALPEQTLIIEPDNLDKWAILSPLQDYQSLPKVTVLEAICNAGISGMGGAG
FPTHIKAAPKKDVEFIIINGVECEPYITSDDRLMREHAWQIRQGIDVLCHLLSPKQVYIAIEDNKPEAIEAMRVACQQSE
QYKVVPIATKYPAGGEKQLIQVITNREVPKQGLPIDVGVIMHNVGTCFAIADAIFSGKPLIQRVVTITGKAVETPKNVWA
LIGSPVAHLLSSAGYVAHRQAQKHIIMGGPMMGFTVASDQVPVVKITNCLLLPTSDEMAEPEAEQPCIRCSACADACPVS
LLPQQLFWHSKAKELDKAQDYNLFDCIECGACAYVCPSEIPLVHYYRVAKAEIRVEQEEKQKSDKARERFESRAARLVRE
QEARDEKHRKAAEARKSAMQNKGNDAQDKIAAALARAKAKKAEQVQTTANNPDVSSEQATLPKAAESATVTSTESATQKS
GTSKDDRVAAAIARAKAKKAQRSAPVEADISSEHETQSEAAEPATVTSTESATQKSGTSKDDRVAAAIARAKAKKAQRSA
PLEADTSSEHETQPKTVENSQATGAETASQKSGTAKDERVAAAIARAKAKKAQKSAENLASNPPSESDTSLDAPTTASDS
ASIRSLNKPNAQTQSNDAVKSKDERVAAAIAKAKAKKTLKETQNASAESGSASGPISNHQSEPAQEPVEKTPEQYDVQER
DPAEQKKARIAAAVAKAKAKKLAKDQTSGETQSPSDKPITPSPEAQDAQQTQEPQVTDAEHALDEKKRRIAAAVAKAKAK
KAAQMKSSEE

Sequences:
NA

Specific function: NA

COG id: COG4656

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA