Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898657

GI number:

Start: 2849088

End: 2852603

Strand: Direct

Name: Not Available

Synonym: Patl_2341

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898648

Following gene: 109898658

Centisome position: NA

GC content: NA

Gene sequence:

>3516_bases
ATGTTAAAAGTCATTCCGTGGTTGCTTGTAACGTCGAGTTTGGTCGCGATACCAACATACATACACGCAACGACAGAGGT
AGTTGTTAATTTGAATGTCAAACATTCAGTTGAAGGTAAATCTGAATTTGAGCGCAAAAACCATATAAAACTGCATTCCA
CGCTAAACGATAATGATTGGCAGGGTGAAGAAGACAAACTTAAGTATATGATGGAAGAGTTAGACGTTTATTTTGGTCGA
GATAACGGTGGCACCGTTTGGAATTTTAACCAAGCCATTGAGGACCCAGCCAACATAGGTTATGCAGATCCGCAGAATAT
CATCGCTCGGGGTCAAGCCCAGCGCGAAACCAATTGGGGACAAAACAAGTCTGCTTTACATCAATACGATGGCCGAGGAG
ACTTGATGATAGGCGGCCAACCCAGAGCGCATTATCTAGGTAACACTTCACCTTGTTGCGGTGGAAGTGCTTGGCAAGCA
AAAGGTGGCGACGCGGTCGGTGATTTCCTTGGACAATATGTTAACGAGTTTTTTCGTTCTGCGGGTGATCCCGTGACAAA
GGGACACCTAGCGCCCGTTTACTTTGAAGTGCTTAACGAACCTCTTTATCAGGTAACGGATGCGCCACATGAACTCGGAT
TAGAGCAGCCCATCCCGCCAATCGATATTTTTACCTTTCATAACGACGTTGCCGATGCTTTTCGACAACACAACACCCAT
ATAAAAATTGGTGGCTTTACGGTGGCATTCCCTATATTTGAGCAAAGAGAGTTTGCTCGCTGGGAAGAAAGAATGAAGCT
ATTTATTGATACCAGTGGCAGCCATATGGATGTGTATTCAACCCATTTTTATGATCTTGAGGACGACAATCGTTTTAAAG
GTAGTCGACTCGAAGCAACATTAGACATGATAGATCAATATTCGCTACTCGCTTTAGGTGAAACCAAACCTCACGTTATT
TCAGAATATGGCGGCCGAAATAGACCCATGGAAAATGCGCCTTGGTCTGCATTACGCGATTGGTGGTTTCTTAAAACCGC
TAGCCCCATGTTAATGCAATTTCTCAGTCGTCCCGATTCCGTCTTAACCTCTATTCCCTTTGTCCCCATCAAAGCGTTGT
GGGGCACGGCAGCAGACGGTACGCCCTACAATTGGCGATTACTTCGTCAACAAAAGGAAGCACCGAATGAAACCGGTGAA
AACTGGGTATTTACTGAAATGGTCAAATTTTATCAGCTATGGTCCGATGTAAAAGGCACTCGCGTTGATACCTTTTCCAC
TAACAGTGATTTCCTTATTGATAGCTATGTACAAAATGACAAAGCATATGTGCTGATCAGTAATCTTACTGAACAAGCGG
AAAAAATTGTTGTGCACAAGTACGGCGCGCCTGCGTCAAGTCAGCCCACGACACGCATTAAGCATCTGTATCTCAAAGGC
GCAGCCCCCGCGCTTGATGAAACAAGTCATGCGTCAGATATCCAAGAAGTCACGATTGCTGCTGAAGCGACTATGGTAAT
CGAATACGATTACCCTTCAGACATCGTCATCAACGAAACATCACAAGAGAAAAAGTATTTTGCCACTGAATATTTAAAAC
CCATTTCAGCCAATCAAATCAGTCGCTTTAATATTAATTCGGTTGCTACAAGCGCGCTTGGTGAAGGCATATTGCGCGTT
GTTGTTGGGCGTAAGTTAGGCAAGTCTCTCGCACCAACTATCGCTGTTAATGGAGAAACCTTAACAGCTTCAGCACAAAT
TTCTGGGGATATTCAGAACACCCGAGGCGACTTTTTTGGTGTTATCGAATTTCCTGTCCCCATTGACCTTTTGCGCACTA
ATAACGAAATAGATGTGACCTTTGGCGATGATGGGGGACATATTGCCAGCGTGAACCTTAAAGTGTTTAGCTTCACATCA
GATGTCCGCCCCAGTGCTGGCCCTGTAAAGGGGATCACTATTGAGCCCACATCGGCTGTGGTCGCTGTGGGAAGCACACT
ACAACTAAACCCCACTATCACCCCGTACTTTGCCACCAACCAAAATTATTTTTTGCAATCCAGTGCGCCCGAGGTGGCTA
CTGTAACGCAAACAGGTTTGGTGAGTGCCTTAATGCAGGGGGAAGCGAGGATCACTGCAACCACTGAAGAGGGCAGCTTT
ATTGCTCAGGTAGACATCGAGGTTGAGTTGCCCTCCCCTACGTCGATCACATTCGATGATCAAAGCATTTACGCAAGTAC
GGTATATACCGCAGGTGAAGCTATGCACGTCACCACTGAGTATGATGCTGGTACGGGCCATACTGTGACGGCAGCACTTG
GCGGGGTCGAATACAGACTGCGTCATTTAACCGCTAGTTTTGGCTTAATATCTGATGTTGCTATTGTGCAAGATGGTCAC
GCGGTCAATACTCAACGTGGTACATCTAGCGTCGAATTAGCCCTACCCACCAATTTACAAGCCAGTGCAGACCTCCCTGA
TGGCGAGTTCTATTTTTTATTTGTTAGGGTGGTTTCTAGTAACGGGGAAACTCAATCAACAAGTGCTTTCCCGGTTAGTA
TTGAAGCAGGCAATATTGACACAAGCCCGTCGTTAACACTGGATGATGCGCGTAAATATCGCGATACAATCTACAAAACA
GACCAACAACTTACTGTAACAGCACATTATCAGGCGGGCGATGGAAATACAGTGACGAGTGAGCAAGGCGGCGTGCGCTT
TTACCTACGTGAACTGGACGCAAATTTTGGCCTCATCAATGACATCATTATCGAAGATGCCTCAGCAATCGGTCAACAAG
TAGGTGCTGCCACCGCTACCTTTTCACTAGCAGACTTAACGCCCAGCGCAGCCTTACCTGCTGGGCATTTTTACTATTTG
TTTGCTGTTTTTAATAGCACCAACGGCGATAAATATAACATTCCTGGTGTATTTCCCATTCGTATCGAGCAAGAGGTGAG
TGAGCTTTCCTTGACATTTAGCGAGCCGAATTTATATCGCTCCACAGACTACGAAGTGGGCGGTTCATTAGCGGTTTCAG
TTGATTTTGATATGGGTACAGGCAACGCTGTCAGTGATGAGCTAGGCGGTATACGTTTCTTCTTACGCCATCTGAGAGAA
GACTACTCTATGGTTAAAGACATCATACTCGAAGATGCCAATGCAATTGGTCAGCAATCGGGCTCAGCCAGCGTCACGTT
TTCCCTCGCCAATATAGCGGCGAGTGATGCACTACCCGCCAATGATTTTTACTTTCTTTATGTACTCGTCAAGTCCACTG
ACGGCGCCACCCAAGACCTCGCTGTGCAACGTATCAACATCGTCAGCCCTGCGTTGGTCGGCGATTACGACCTAGATGGC
GACGTGGATATCAACGACATACAAAGCTTAATCGTTGCTATTCATATGCGGCAATCTATCGACCTGTCTTTTGATATGAA
TAGCGATGGTACGGTTAACTTACTCGACACACGACTACTCATGAACGCATGCACCCGAACCCGCTGTGCACCCTAG

Upstream 100 bases:

>100_bases
ATAATCTATTGCCCGCAACTAACCCAATTTACGTGTCGATTCAGTTTTAAGCGAGTTAGTTGAGCCTGTAAAACCACCAC
ATACATAATAGGAACGCACT

Downstream 100 bases:

>100_bases
TCAAACAAAATAAGAATAAGGAATATATCTCATGAAAAAATTACTGTTAATTTTAGCACTGTGTTTTAGCCTACCCAGCC
AAGCGAACTTGCTTACCCTA

Product: agarase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1171_residues
MLKVIPWLLVTSSLVAIPTYIHATTEVVVNLNVKHSVEGKSEFERKNHIKLHSTLNDNDWQGEEDKLKYMMEELDVYFGR
DNGGTVWNFNQAIEDPANIGYADPQNIIARGQAQRETNWGQNKSALHQYDGRGDLMIGGQPRAHYLGNTSPCCGGSAWQA
KGGDAVGDFLGQYVNEFFRSAGDPVTKGHLAPVYFEVLNEPLYQVTDAPHELGLEQPIPPIDIFTFHNDVADAFRQHNTH
IKIGGFTVAFPIFEQREFARWEERMKLFIDTSGSHMDVYSTHFYDLEDDNRFKGSRLEATLDMIDQYSLLALGETKPHVI
SEYGGRNRPMENAPWSALRDWWFLKTASPMLMQFLSRPDSVLTSIPFVPIKALWGTAADGTPYNWRLLRQQKEAPNETGE
NWVFTEMVKFYQLWSDVKGTRVDTFSTNSDFLIDSYVQNDKAYVLISNLTEQAEKIVVHKYGAPASSQPTTRIKHLYLKG
AAPALDETSHASDIQEVTIAAEATMVIEYDYPSDIVINETSQEKKYFATEYLKPISANQISRFNINSVATSALGEGILRV
VVGRKLGKSLAPTIAVNGETLTASAQISGDIQNTRGDFFGVIEFPVPIDLLRTNNEIDVTFGDDGGHIASVNLKVFSFTS
DVRPSAGPVKGITIEPTSAVVAVGSTLQLNPTITPYFATNQNYFLQSSAPEVATVTQTGLVSALMQGEARITATTEEGSF
IAQVDIEVELPSPTSITFDDQSIYASTVYTAGEAMHVTTEYDAGTGHTVTAALGGVEYRLRHLTASFGLISDVAIVQDGH
AVNTQRGTSSVELALPTNLQASADLPDGEFYFLFVRVVSSNGETQSTSAFPVSIEAGNIDTSPSLTLDDARKYRDTIYKT
DQQLTVTAHYQAGDGNTVTSEQGGVRFYLRELDANFGLINDIIIEDASAIGQQVGAATATFSLADLTPSAALPAGHFYYL
FAVFNSTNGDKYNIPGVFPIRIEQEVSELSLTFSEPNLYRSTDYEVGGSLAVSVDFDMGTGNAVSDELGGIRFFLRHLRE
DYSMVKDIILEDANAIGQQSGSASVTFSLANIAASDALPANDFYFLYVLVKSTDGATQDLAVQRINIVSPALVGDYDLDG
DVDINDIQSLIVAIHMRQSIDLSFDMNSDGTVNLLDTRLLMNACTRTRCAP

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA