Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898563

GI number:

Start: 2726999

End: 2729290

Strand: Direct

Name: Not Available

Synonym: Patl_2246

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898558

Following gene: 109898567

Centisome position: NA

GC content: NA

Gene sequence:

>2292_bases
ATGTCTTTCATCGCTCGCCTTAAGTTACAACTTAAAGATTATTTCTATCTACAAGATGACTACTCCCCCTTAGCCAGAGT
CGAAGCTTGGCGCATAAGCTCGCTCCGCATCATGCTCGTTTCGATTTTACTCTTGTGTTCTGTGTTTGTAATTCAAAGCG
CCTGGCAAAGTGTGACAGAAAAAATAGCCTATGTTATCCCCATGTCCCTCACCTTTTATATTGCATTGACCGCTATGCTT
TTCATCTCCCGCCGTCACTATTACTTGAGTTCTTGTGGTTTGATTGGCTTAATAGTGTTGGCAGCAATCAGTTTCAACGC
CACCCAGAACAATCAAACCTTATCTATGCTCGGCCCTGTCGTCATGTACTCTACGCCATTTGTTGCTTTTATTTTATTAG
GCTGGAAGGCGGGATTGTTTTGTATTTTTCTAAACTTTTTACCACTGTATATTTTAATAAACCAGATTTCATTAGCAGAT
TATTTCACCCCTTTTCCAGTACTAAAACATGCTAATTATTACTTGCATGTCATCTTGTTCGTTTTTACCAATATTTGTAT
TCCGTTGGCCATCGCTCGAGCGAGTATCGCAGCAAAGCGAGGTAACCAATTTAACATTGAGCGTAATCAAATACTCACTA
GCCAAAACCAGTTATATCACGCTCTTTTTGTCGATGCTCAGACCGCGAAAATCATCGTTGATAACAAAAGAAATATTATT
GAAGCCAACGACGCTGCTATCTCTCTTTTGCGCAACAATTTGCCTAAACAGTTTATAGGAGAACGAGTCGACAGCATTTT
TCCGGAATTATCAGAACAAAATGACAAACTAGTTGTTAATCGTACTTTAGGCGCAAAAATGAAAGTACTCGAATTGAGTG
CTCAGTCGATAAACGATGAGTTACACACCTTGATAACGATTCAAGATGTAAGTGCTAAAGCATTACTTCACAAGACTTTG
GCGGTGCAAACCCAAGCAAGACAACGCCAGAAGCTATATGACGAGAACATTGGCTTGCCGAACCGACAATGGTTAGAAAA
TAAACTTTCAGCCAATGCGGCGCAATTCAATACTGTCATTTCGTTATGTGCGATTAGAATAAACAATGCTCACTTTATTG
AACAAAAATACGGTTTCTTATATTTGCCAAAAGTGCTTAAAAGACTATCAACGATATTAAGTGAGCAAATAGGTGATCGT
AGTTGTATTGCAGTACTTGATAAACACAGTTTAGGTTTTGCGATTTCCATTCTGGATGATGCAATCATCAAAAGTGCAAT
GCAGCAAGTGGTTTCAACACTCCCTAGAAGTATAGTGTTTGATGATATCTCCATACACGTTGATTGTAAGGCTGGGGTAG
CTACTCATCAAATAGACGAAGATGTAAGCCAGTTAATCAATAACGCGCTGCATGCGGTGACAGATAATGACGCGGTGATA
AACTATTATGAAACTGGCAGCCAACAGCGCTTCATTGAACATCAGGAAATCAGTATTTTACTTAATGAAGCGCTATCGAA
CGACGAATTATACGTGGATTACCAGCCTAAAGTGCGCGGCGATGGCACCATCATTGGTATGGAAGCGCTGCTGAGGTGGA
ATTCCCCCATCATTGGTGGCGTATCCCCAGGGGTATTTATTCCTATCGCTGAGCAGTCTGGTTTAGTGTTGCGACTCACC
CGTTGGTTAGTCAACCACGTATGCATGCAGATAAGGCAATGGGAAGACGAAGGGCTGGATATTGTGCCTGTTGCGATTAA
TATTTCGGGCCCCGACCTAGATCAGCCTGATTTTAAAAAGTACCTAATTAATTGTGTGGTTGAACAGAACATCAAACCTC
ACTTCATCGAGCTTGAATTGACTGAGTCGGCCAAAACCCGAAATATCCCCGACGCCATTGCCACAGTGCAATATTTAGCA
AGCTTTGGATTCTGTATCACCTTAGATGACTTTGGTGTGGGCTACTCTGGCTTATCTAAACTAACCAACTTCCCAGTACA
AAGAGTAAAAATAGACCGCCAGTTTATTACTAATATTCAAAGTGACGCTAAAAATGCACAAGTTGTCGAAGCTATTGTGG
CCATGTGTAAGGTGTTTAAGATTGATGTATTAGCTGAAGGCGTTGAAGACCTACGAGAAGTAGACTGCCTATTAGAAATG
GGGTGTAAAAGTTTTCAAGGTTTCGCTTTCGCCCGACCAATGAGCAGACAGAACATCGCAAAATTGATAGACAAGACGCA
AATGCCAAACGTAAAGCTGCCATTACAACGTAAAAATATGATTAACAATTAA

Upstream 100 bases:

>100_bases
TTATTTACCATCACCTCTATAAAATGTGAATGATAATCAGTAACATAGTCGAAAATTCAGTGTTGTAACCAAGTACTACG
TATAGTTGGTCAGGATTTAT

Downstream 100 bases:

>100_bases
TTCTCTGCTTTAAATGGCAGCGTTGTTGGGGCAATTACATTTAGTGAAAGCTAACCTGCCCAATTCAGAATAATTAAAAT
AAGTTCATTCGTGCCACTTA

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>763_residues
MSFIARLKLQLKDYFYLQDDYSPLARVEAWRISSLRIMLVSILLLCSVFVIQSAWQSVTEKIAYVIPMSLTFYIALTAML
FISRRHYYLSSCGLIGLIVLAAISFNATQNNQTLSMLGPVVMYSTPFVAFILLGWKAGLFCIFLNFLPLYILINQISLAD
YFTPFPVLKHANYYLHVILFVFTNICIPLAIARASIAAKRGNQFNIERNQILTSQNQLYHALFVDAQTAKIIVDNKRNII
EANDAAISLLRNNLPKQFIGERVDSIFPELSEQNDKLVVNRTLGAKMKVLELSAQSINDELHTLITIQDVSAKALLHKTL
AVQTQARQRQKLYDENIGLPNRQWLENKLSANAAQFNTVISLCAIRINNAHFIEQKYGFLYLPKVLKRLSTILSEQIGDR
SCIAVLDKHSLGFAISILDDAIIKSAMQQVVSTLPRSIVFDDISIHVDCKAGVATHQIDEDVSQLINNALHAVTDNDAVI
NYYETGSQQRFIEHQEISILLNEALSNDELYVDYQPKVRGDGTIIGMEALLRWNSPIIGGVSPGVFIPIAEQSGLVLRLT
RWLVNHVCMQIRQWEDEGLDIVPVAINISGPDLDQPDFKKYLINCVVEQNIKPHFIELELTESAKTRNIPDAIATVQYLA
SFGFCITLDDFGVGYSGLSKLTNFPVQRVKIDRQFITNIQSDAKNAQVVEAIVAMCKVFKIDVLAEGVEDLREVDCLLEM
GCKSFQGFAFARPMSRQNIAKLIDKTQMPNVKLPLQRKNMINN

Sequences:
NA

Specific function: NA

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA