| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109898548
GI number:
Start: 2701461
End: 2704583
Strand: Direct
Name: Not Available
Synonym: Patl_2231
Alternate gene names: NA
Gene position: NA
Preceding gene: 109898547
Following gene: 109898549
Centisome position: NA
GC content: NA
Gene sequence:
>3123_bases ATGAATAAGCCCGACATGCAACAGAATCAACAAGAGCAAGCCAAATTCGCCGCTGCAGGCGCCAGCTTAGCGGCCTTTGC TATGCGACGCCCCGTGACAATAGGAATGTTGTTCTTGTCCATGTTGTTATTTGGCATCTTGGCCTCGCAACTATTACCGC TGGAGAAATTCCCCAGTATTGATATCCCTGAAATAGCCATTCGAATTCCTTATGAAAATGCCACACCGGCTGAAATAGAG AAAATGATCACTCGCCCAGTGGAAGAAGTACTGGCCACCATGTCAGGCATCAAGCGCTTACGTTCGAAGTCAACCGAAGA CGCGGCTGAAATACAGCTACAATTTGCCTGGGACGAAAACCTCAAAGCCAAGGGCATTGAAGCCAGAGAAAAGATAGACG CCATTCGCAATAACTTACCTGCAGATGTAGAGCGAATTTTGGTTTATCAATTCAATACCAGTGATTTACCTATTTTCCAG TTGAGGGTATCCAGTGAGCGTGACTTGTCAGATGCCTATGACTTACTTGAGCGCAACCTTAAAATACCCATTGAACGAGT TGCAGGTGTGTCAAAAGTTGAGTTATACGGCGTGCTTAAAAAACAGATCGCTATTCGTATAGATACCCAAAAACAAGCCA GTTTGGGTATTACCAATACGCAACTGCTCAGTGCGCTGCGCCAAGCAAACTTTGCTATGACTGCAGGCTCTTTTTACGAC CTAGAACAAAAGATAACCATCAATCCACAGGGCGAATTTAGCAAAATAGAAGACATTAACGCGTTGATCATCAAAAAGGG CGTACTGTTAAGTGACATCGCCCGAATTGGCTATGAAAGCCCTAAGCGCACCGAGGGCAGACATTTAGACAGAACCTACG CCGTTGGCTTTAATATCTATAGGGAGTCAAACAGTAACTTGGTCGCGGTGTCCGATGCAGTCATGAAAGTCATTAACCAC GCCGATGAGAGTCCTGCCTTTACAGGCATCACACTTTTCGTGATGGATGATGAAGCTGCAAGTGTAACCGAATCCTTGAG CGATTTACTCAATGCAGGCTTACTCGGTGCACTGCTATCCGTTATGGTGCTGTATACGTTTTTACGAAACTTAACCACAA CATTAATCGTTGTTTTATCCGTGCCCTTTTCTATTTGCATCACGTTAGGGTGTATGTACTTCATGGGGTACACCGTCAAC ATACTGTCCATGATGGGTTTGATGCTTGCGGTGGGCATGTTAGTGGATAACGCCGTGGTAGTCACCGAGAGTATTCAACA AGAACGCAATCATTACCCTAACCCAATTGACGCCACAAAAGCAGGTGTGGGTAAAGTCAGCTTGGCAGTGATTGCAGGGA CGACCACCACAGCAATAGTATTTTTACCTAACATAATTGGCGTAAAAGTGAATCTCACCATCTTTCTTGAGCATGTGGCC ATCGCTATTTGTATTTCATTGTTCGCGTCTTTGCTTATCGCCCAAACCTTGATCCCCCTGCTTACTAGCCGATTATCCAG CGGCCTATCGAGCAAAACCGTGAGTGCAACTGCTCAAGCACCTGGCATGGGTAAACTCGCCAAACAATACCAACGCGTCC TTAGCTGGTCTCTAACGCACCGTGGCCTAACGTGTGTTATTGCTCTACTGATACTCGTCAGCACGGCTATTCCTATGCAG TTTGTCACTGGGGATGATGATGACGACAACAACAGTCGGTTATGGCTTAACTATGACATACAAGGCAATTACAGTTTGGC TGAGGTTGAAAAATCAGTCGACAAAATGGAAGCTTACTTGTACGCCAATCAAGATGCGTTTCAAATTGAGCAGGTCTACA CCTATTTTACAGCGGGTGAAGCGACGTCAGCGCTGACCCTAAAAAATGATATGCCAGTCTCTAAAGGCGAACTAAAAGAG CGGATCCTCAAAGATATGCCTAAGTTTGCCCGCGCTCGTCCATCCTTTAAGTGGGAAGAAGGTAATGGCGGTGGTCTGCA GCTAACCTTATTAGGTGACTCTTCTGCATCCTTAAGTGACGTCGCTGAACGTGTATTACCAGCAATTAAGCGAATTGATG GCCTGACTGACGTGGGAATTGAGGGCAATAATCAGAAATTCGAACTGCAAGTGATTGTCGATCGAAACAAAGCTTATCGT TATGGCTTATCCGCCAGCGATGTTGCCAACACTATTGCCAGTGGTTTACGCGGTACTAACCTTCGTACGTTTAGAGACGC TGAAAGTGGTGAGATTGGGATACGTATGCTGTTCGATGAAGCACTGCAGGAGTCTATTACAGAACTTAGAAACCTCACCA TTTCTCGCATTGGTCAGCGGACCATTACGCTAGATATGGTCAGCGAAACCAAAATCGTACCGCGCTTAGCAGAAATCCGC CGTAGTTACCGTCAAACCTCCTTGACCATAGGTGCAAATATGGAAGAGGATGTTACGCTGCAGCAAGCCAAAGAGCGTAT CGAAAACGTGATGCAGTACCTCACCCTACCCGATGGTTATAGTTGGACCTTTGATGGCAGTATCGATAGACAAAACCAGA ATGAAGCTGTCATGCAAACTAACATGTTATTGGCCATTTGCATGATTTACATCGTGATGGCTGCACTGTTTGAATCATTA CTGTTACCCACCGCAGTCATCACCTCATTATTATTCTCACTGACCGGTGTATTTTGGGCGTTGTTTGTCACAGGCACCGC TATGTCGGTCATGAGCATGATAGGCATGCTGATATTGATGGGAATTGTGGTGAATAACGGCATTGTGCTGGTCGACCGGA TCAATCAGTTGATTGGTCAGGGTATAGCAATCAATGCCGCCGTCATTGAGGCATGTTTAACCCGGGTGAGACCTATTTTG ATGACAGTTGCGACCACTATTGTTGGCTTAGTGCCATTGGCACTAGGCAATACCTCTATTGGCGGTGATGGCCCGGCCTA TTCCCCTATGGCGATAGCGATCATTGGTGGCTTAACCTTTTCTACCGCGACCAGCTTGGTGCTCGTTCCTCTGGCGTATG TATTACTGCTGCGCATGCGAGCGAAAACCGCACACTTAATAGAGACCTCGAAACAATGGGCGAATAAAGTCGTTAAGATT TAG
Upstream 100 bases:
>100_bases TTCTTTATTCCGTGTTTATATGCCCTGTTTGATCGCAAATCAGATGCATTAATGGCGCAAAATGCGCAACCGACGAGCAT GACAAACAAGGCGCTAGGTT
Downstream 100 bases:
>100_bases CGTGGCGATGAAGCCTTTGAATTGTCATACATAAATTGAGAATTCAAAGGCTTTGGTTTAGGCTATCGAAAATTTTGCCA GTCGAGTTGCTATGATCACC
Product: acriflavin resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1040_residues MNKPDMQQNQQEQAKFAAAGASLAAFAMRRPVTIGMLFLSMLLFGILASQLLPLEKFPSIDIPEIAIRIPYENATPAEIE KMITRPVEEVLATMSGIKRLRSKSTEDAAEIQLQFAWDENLKAKGIEAREKIDAIRNNLPADVERILVYQFNTSDLPIFQ LRVSSERDLSDAYDLLERNLKIPIERVAGVSKVELYGVLKKQIAIRIDTQKQASLGITNTQLLSALRQANFAMTAGSFYD LEQKITINPQGEFSKIEDINALIIKKGVLLSDIARIGYESPKRTEGRHLDRTYAVGFNIYRESNSNLVAVSDAVMKVINH ADESPAFTGITLFVMDDEAASVTESLSDLLNAGLLGALLSVMVLYTFLRNLTTTLIVVLSVPFSICITLGCMYFMGYTVN ILSMMGLMLAVGMLVDNAVVVTESIQQERNHYPNPIDATKAGVGKVSLAVIAGTTTTAIVFLPNIIGVKVNLTIFLEHVA IAICISLFASLLIAQTLIPLLTSRLSSGLSSKTVSATAQAPGMGKLAKQYQRVLSWSLTHRGLTCVIALLILVSTAIPMQ FVTGDDDDDNNSRLWLNYDIQGNYSLAEVEKSVDKMEAYLYANQDAFQIEQVYTYFTAGEATSALTLKNDMPVSKGELKE RILKDMPKFARARPSFKWEEGNGGGLQLTLLGDSSASLSDVAERVLPAIKRIDGLTDVGIEGNNQKFELQVIVDRNKAYR YGLSASDVANTIASGLRGTNLRTFRDAESGEIGIRMLFDEALQESITELRNLTISRIGQRTITLDMVSETKIVPRLAEIR RSYRQTSLTIGANMEEDVTLQQAKERIENVMQYLTLPDGYSWTFDGSIDRQNQNEAVMQTNMLLAICMIYIVMAALFESL LLPTAVITSLLFSLTGVFWALFVTGTAMSVMSMIGMLILMGIVVNNGIVLVDRINQLIGQGIAINAAVIEACLTRVRPIL MTVATTIVGLVPLALGNTSIGGDGPAYSPMAIAIIGGLTFSTATSLVLVPLAYVLLLRMRAKTAHLIETSKQWANKVVKI
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA