Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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The map label for this gene is rlmL

Identifier: 109898322

GI number:

Start: 2444192

End: 2446297

Strand: Direct

Name: rlmL

Synonym: Patl_2005

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898321

Following gene: 109898323

Centisome position: NA

GC content: NA

Gene sequence:

>2106_bases
ATGTTTGAATTTTTAGTCACCACGTCCAAAGGGCTCGATGAGCTGCTTGCCCAAGAAATAACGAAGTTGTGTCCACAACT
GTCTGTAAAAACCAAACCTGGCCAAGTGCTGTTCACCGGTGAGATCGAACAAGCATATAAAATTTGCTTGTGGTCACGCC
TTGCGAACAGGGTGATGTTGAAATTAGCCGATGGCCATGTAGACAGCGCGGATGATGTATATCAAATTACTAGCAGCGTA
AACTGGACATCGCACTTCAGCGTGAATAGTACATTTGTCGTTGATTTCGTCGGCGCGAGTCATTGCATTAACAATAGCCA
GTTCGGGGCGTTGAAAATTAAAGATGCGGTGGTAGACCAATTTAATGAATTATTTGAGTCGCGGCCCTCAGTGAGCAAAA
TAGAGCCCGATATTCGTATTCAAGGGCGAATGTGGAGCGACAAGTTGACTGTGTATTTAGACTTGTCAGGTTCAAGTTTA
CACCAACGCCATTACCGTACCAAAACTGGTTTGGCCCCTGTTAAAGAGCATATCGCGTGCGCTATGTTGGTTCGCAGCGG
ATGGGCCAATGATCAGCAAGCGCCATTAGTTGACCCTATGTGCGGTGCGGGCACTATTGCTATTGAAGCAGCGTTAATGG
CAGCCAATATTGCCCCTGCACTTAAGCGTGAACGATGGGGTTTTACCCGTTGGTTACAGCACGATGCGACGTTGTGGCAG
TCATTATTAGACGACGCAAACGCTCAAATTATTACCCCTAACTGTGTGATTAGCGCCAGTGACATTGATCATGGTGTTGT
GTCGATAGCGAAAGAAAATGCGGATGCAGCAGGGGTTTTCTCTGGGATAAAATTTAACACCATAGATGCCTGCAAAGTTA
TTCCACCTAAAGGACACACCAAAGGTTACATTGTGAGTAACCCTCCTTATGGCGAGCGCTTGAGCGAAATAACAGCGCTG
TTACCGTTATTTCAGGCGTGGGGAACAAGTCTTAAAGAGCATTTTAAAGGTTGGAACTTATCTCTATTAACGTCTAATCG
AGATTTGTTACGCAGCATGAAGATGTTTGCTCACAAAGAATACAAGTTAATGAATGGCAAACTTGAGTGTCAGTTAGTCA
ATTTCGCTTTGGATGAAAAAAACTGTATTACCCGTGAAACAAGTCTGAGTAATAATGATTTCGCGAATCGTTTGAATAAG
AACATCAAACGTTTGAGCAAATGGCTCAAAAGTGAGAATACAAATTGTTACCGTATTTATGATGCTGATTTGCCAGAATA
CAACGTCGCTATTGACCGCTATGGTGATTGGTTGGTCGTACAAGAGTATGCTGCACCAAAAAACGTACCTGAAGCCAAGG
CGAAACGCCGGTTGCATGAAGTGATTGTGGCATTGCCGCAAGTCGTTGATGTACCAGCTGAACAAATTGTCATGAAGGTA
AGAGCGCAGCAAAAAGGTAAGAGTCAGTACGAAAAGGTATCGCAAAAACAAAAAATGCTGGAAGTGTTTGAAAATGGTGC
CAAATTCAAGCTGAATCTGACCGATTACCTTGATACCGGTTTGTTTTTAGATCACCGAGTAACACGTCAACTTGTGCAGC
AACGGGTTAAAGACAAGGACGTTCTAAATTTGTTTGCCTACACAGGCAGCGTTTCCGTGCATGCAGCGTTGGGTAAGGCA
AAGTCAGTTACCACGGTAGATATGTCAAATACCTATGTGGATTGGGCGAAAGAAAACTTTGCTTTAAATAAGCTAAAAGG
GCCTTATGAATTTATTCAAGCTGACTGTTTAACCTGGCTTGAGCGCCACAACAATCAATATGATTTTATCTTTATAGATC
CACCGTCGTTTTCTAACTCAAAGCGTATGGATACGACGTGGGATGTACAACGTGACCACGTGGCGCTTTTACGTAACGCG
GTTAAATGCTTGCGCCCAGGTGGAGAGATCATGTTTTCAAATAACCTGCGCCAGTTCAAGTTAGATGAAGAGGGCGTAAG
TCAATTAGGCTTAACAATTCAAGATATAACCCAAAAAACACTGCCGGAAGATTTTAAGCGTAACCCTAAAATTCATGGCT
GCTGGGTATTAACACTTAATGCGTAG

Upstream 100 bases:

>100_bases
TTTCATCTCTTCAAGAACAAATTGATTTTTACGTATTTAGCCATGCGACATGCATTTATTTGCCGTATAATCGCGCCCGA
AGAATTAACTGAGTTGGTAT

Downstream 100 bases:

>100_bases
GCCTGATATATATTTTTACACAGGCAAGAATTGTTGCCTGTGTGATGACGCACAATTGATATTAAATCGAGCTGCGCCAG
ATGTAGATTGCGTCAAACTT

Product: 23S rRNA m(2)G2445 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>701_residues
MFEFLVTTSKGLDELLAQEITKLCPQLSVKTKPGQVLFTGEIEQAYKICLWSRLANRVMLKLADGHVDSADDVYQITSSV
NWTSHFSVNSTFVVDFVGASHCINNSQFGALKIKDAVVDQFNELFESRPSVSKIEPDIRIQGRMWSDKLTVYLDLSGSSL
HQRHYRTKTGLAPVKEHIACAMLVRSGWANDQQAPLVDPMCGAGTIAIEAALMAANIAPALKRERWGFTRWLQHDATLWQ
SLLDDANAQIITPNCVISASDIDHGVVSIAKENADAAGVFSGIKFNTIDACKVIPPKGHTKGYIVSNPPYGERLSEITAL
LPLFQAWGTSLKEHFKGWNLSLLTSNRDLLRSMKMFAHKEYKLMNGKLECQLVNFALDEKNCITRETSLSNNDFANRLNK
NIKRLSKWLKSENTNCYRIYDADLPEYNVAIDRYGDWLVVQEYAAPKNVPEAKAKRRLHEVIVALPQVVDVPAEQIVMKV
RAQQKGKSQYEKVSQKQKMLEVFENGAKFKLNLTDYLDTGLFLDHRVTRQLVQQRVKDKDVLNLFAYTGSVSVHAALGKA
KSVTTVDMSNTYVDWAKENFALNKLKGPYEFIQADCLTWLERHNNQYDFIFIDPPSFSNSKRMDTTWDVQRDHVALLRNA
VKCLRPGGEIMFSNNLRQFKLDEEGVSQLGLTIQDITQKTLPEDFKRNPKIHGCWVLTLNA

Sequences:
NA

Specific function: NA

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA