Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898288

GI number:

Start: 2393044

End: 2395425

Strand: Direct

Name: Not Available

Synonym: Patl_1971

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898279

Following gene: 109898289

Centisome position: NA

GC content: NA

Gene sequence:

>2382_bases
ATGAACGCCAGTAAAAAGCTTTTGTTTGTTGCGATTGTAACAGCGCTAACTGGATGCAGTGCGAGTGAAACGAGTGACGA
GGTTAGTCACTCCTCAGCCGCAGAGGTGCAACCAGTTGATCACATTGAGCAACAGGTAAAAACACTTAAAACATTGTTTA
CTGCCAAAGATAGTGACTCCCTCAAGCAGGTTAAATACACAAATGCCAGCGGCACCGTGGTTGGTACATCAGGCGATTCT
CTCAAAGTAGTCTTTCATGGGAAAGAGAATATCAACAGTGCTGTTGAGTTTATCCCTGATGTTGCTTGGGATTGGAGCGA
TTTAGACGATTTTAATATCGCTTTTGACATCGGTAATGAAGGAGAGCACTCAGTTCAGTTATTCCTAAATATATCTGATA
CCAATGGCGATACGTATACCCGTTCAGTCAGTGTGCCTGTTGGGCCACAAAGTACTTATTATGCAAAAATGGCGGGGCAC
GACCTCGCCAAATCAATCAGTGACGATAAGAACGAATTTAATTTTACCTCGGGCTTACGCTCTAACCCAGACACGTGGCA
TTCAGATGACAAGCAGTTTATCTCTTTGTGGGGTAAAAAAAATCTTAAACTCAGTGGCATAAGCAAGATTTCGTTAAGCG
TACAAAACAATTTATTCGATAAACAAATCACTATAAACGATATTCGATTACGCCAAAATCCGCCTATGGATACGCTCTAC
CTTACGGGTGTGGTTGATCAATTCGGGCAAAATGCAAAGCGCGAATTCGACGGGAAAGTGCACTCGTTAGAAGAGTTATA
CAGCGCAAGAGATAAAGAGTTGAAAACCTTAGACGGAAAATGGAATGCGCCGCGCTCAAAGTGGGGCGGTTGGTTGAACG
GACCTAAGCTGGAAGGCACGGGCAACTTTCGAACAGCTAAATATCAAGGCAAATGGAGCTTAGTTGACCCCGACGGTTAC
CTGTATTTTGCCACTGGTGTCGATATCATTCGCTTGGCTAACTCGTCTACAATGACCGGTTATGATTTTCCGCCGGAGGT
GTTAGTTAAAGCAGATAACGCTGATGTGACGCCATCTGATTCTCAGGGCCTTAATCGCGTTGCTGACAGTGCCGTGCCAT
CACGTTTTGTAGCATCTGAACTCAGAAAAGATCTGTTCACTTGGTTGCCAAGTTACGAGGAACCTATGGGGCAGCACTAT
GGTTACCGTACTGGGGTTCATTCAGGGCCACTAAAACAAGGCGAAACCTATAGTTTTTATGCAGCCAATTTAGATCGTAA
ATACAGTGAAATGACACCTGATTACATGCAAAAGTGGCACGATGTGACCCTAGATAGAATGCGTAATTGGGGGTTCACAT
CCTTAGGTAATTGGACAGATCCTGCATTTTACGACAACCAGAAAGTACCGTTTTTTGCTAACGGTTGGATCATCGGTGAC
TATAAAACCGTCTCTAGTGGCGATGATTTCTGGGGCAACATGCCGGATGTGTTCGACCCTACATTCAAAGAGCGTGCGTT
GCATACTGTCAGCGTCATCGCACAAGAAGTGAAAAACACCCCTTGGTGCGTGGGTGTATTTATCGATAACGAGAAAAGTT
TTGGCCGTAGTGAAACGCCTCAGTCGCGCTACGGCATCGTGTTCAATACCCTAAAACGCGATGGTAGTGAAGTGCCGACT
AAGGCGGCGTTTACGACAATGCTTAAAGATAAATATGCCAGCATCGAGGCATTAAATGCCGCTTGGGGTAAAAACATTTC
CTCTTGGTCTGAGTTTAATAAAGGCATTGATTCAGTGCTAGCGACTGATGAAACGCACGCCGAACAGCAATTAGCTGATT
ACAGCGATATGCTGTATGCCTATGCCGAAAAATACTTTTCAACAGTTGATGCTGCTATGCAAACTTATTTGCCTAATCAT
CTCTATTTAGGGTCTCGCTTCGCGGATTGGGGCATGCCTATGGAGGTGGCAAAAGCGGCTACTCAGTACGTGGATGTGAT
GAGTTACAACGTATACAAAGAAGGCTTACATCCAAAGGGCTGGGGATTTCTAAAAGAGTTTGACATGCCATCAATTGTGG
GCGAGTTCCACATCGGAGCTACTGACAGCGGTTTGTTTCACCCAGGCTTAGTACATGCTGCTAATCAGCAAGACAGAGCT
GATATGTACCAAGATTATATGGGAACGATTATTGATAATCCGTACTTTATTGGTGCGCATTGGTTCCAATACATGGACTC
GCCAATTACTGGTAGAGCCTTTGACGGCGAAAACTACAACGTAGGCTTTGTTAACGTGACTGACACCCCTTATGCGCCTA
TGGTCAATGCTGCCAAAGACCTACACAAAGGCATGTACGAACGTCGTTTTACATCTAACTAA

Upstream 100 bases:

>100_bases
ACTCGCACTATTTAATTAATTGTTAACAATTTACATGTCGAGCGTGCTGTGTATAATCCCAAAATGTAAATTTTGTTAAT
ACTTCTCAAGAGGGATAATT

Downstream 100 bases:

>100_bases
TAACCCTTTAAAGAGCGCGCAGCTCCTTGGCTGCGCGCTTTAAGGCAAGTATCGATTATAATCATACTTTCGGGTTTCAT
CCTGTCTAATCATTTTAACG

Product: agarase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>793_residues
MNASKKLLFVAIVTALTGCSASETSDEVSHSSAAEVQPVDHIEQQVKTLKTLFTAKDSDSLKQVKYTNASGTVVGTSGDS
LKVVFHGKENINSAVEFIPDVAWDWSDLDDFNIAFDIGNEGEHSVQLFLNISDTNGDTYTRSVSVPVGPQSTYYAKMAGH
DLAKSISDDKNEFNFTSGLRSNPDTWHSDDKQFISLWGKKNLKLSGISKISLSVQNNLFDKQITINDIRLRQNPPMDTLY
LTGVVDQFGQNAKREFDGKVHSLEELYSARDKELKTLDGKWNAPRSKWGGWLNGPKLEGTGNFRTAKYQGKWSLVDPDGY
LYFATGVDIIRLANSSTMTGYDFPPEVLVKADNADVTPSDSQGLNRVADSAVPSRFVASELRKDLFTWLPSYEEPMGQHY
GYRTGVHSGPLKQGETYSFYAANLDRKYSEMTPDYMQKWHDVTLDRMRNWGFTSLGNWTDPAFYDNQKVPFFANGWIIGD
YKTVSSGDDFWGNMPDVFDPTFKERALHTVSVIAQEVKNTPWCVGVFIDNEKSFGRSETPQSRYGIVFNTLKRDGSEVPT
KAAFTTMLKDKYASIEALNAAWGKNISSWSEFNKGIDSVLATDETHAEQQLADYSDMLYAYAEKYFSTVDAAMQTYLPNH
LYLGSRFADWGMPMEVAKAATQYVDVMSYNVYKEGLHPKGWGFLKEFDMPSIVGEFHIGATDSGLFHPGLVHAANQQDRA
DMYQDYMGTIIDNPYFIGAHWFQYMDSPITGRAFDGENYNVGFVNVTDTPYAPMVNAAKDLHKGMYERRFTSN

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA