Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109898181

GI number:

Start: 2251723

End: 2254044

Strand: Direct

Name: Not Available

Synonym: Patl_1862

Alternate gene names: NA

Gene position: NA

Preceding gene: 109898180

Following gene: 109898182

Centisome position: NA

GC content: NA

Gene sequence:

>2322_bases
ATGGAATTGATGATGAGATATGTAGTCGCAGTCGGTGTAATGTTAAGTTTTGAGGGCATGGCAAGTGAAATCGCCAGTCT
TGAAACAATCAGTGTGTTTGGCCAAAATCCTCTTTTTAGTGAACACAACACCACCAGTATCATTGGCAGTATACAAACCA
TTAGCACAGAGGAGCTAGCGCAAAGCAATGCGCTCTCGCTGTCGCAACACATGAAAAATCGCTTAAACAGTGTGCATATC
AACGATGTACAGAACAATCCTTTTCAACCTGACGTGCAGTACCGCGGATTTACCGCGTCGCCTTTGCTTGGGTTACCACA
AGGTATTTCTTTATACCTCAACGGTATTCGATTTAACGAACCATTTGGCGATACCGTCAACTGGGATCTTATTCCTTTTG
CTGCCCTTGATAGCGTCGCGTTGTACTCGGGCTCGAACCCTAGTTTTGGGCAAAATACCTTAGGCGGTGCATTAGACATG
CGGGTCAAAAATGGTTTCACCTTCGTGCGTAATGAACTGGACCTACAAATAGCCAGCTTCGGTCAACGCCAAGCGACGGT
GCAAAGCGGCGGAAACAATGGCCGTTGGGGCTATTATGTGGCGATTAACCGTTTGAGCGAAGACGGCTGGCGAGACTTTT
CAAGCAGTGATTTGAAACAGGTGCTAGGCACACTAACCTACCAAGGGGATATTCATCACCTTGAGTTATTCGCCGCGGCT
AATGACAACGCCCTGACCGGCAATGGTGCTGTGCCCGAGGGATTACAAGTCGCCCAGGGGTACGACGCCATTTACACCTA
CCCGGATAAAACCGAAAACGATCACCGCATGTTTGCGCTTAGTAGTGAGTCAGCGTTAGGCAACGGTTTTACAATGCAAG
CAAACAGCTATTACAGACGCAACAATATTGACACCACTAACGGTGATGACAGCGACTACGAAGAATGTGAGTTTAATAAT
GTTGTTACCTTGTGTGAGGAAGAAGATGACGAGGTAGAGCGGGTTGAGTTTGTGGGTCATGCCCCAGAGGTAAGCTTCAG
TGACATTTCTGATGTGGACGCTGACGATATAGACGGCACGTTGAACCAAAGCGCTACTGAAAACAAAAGTTATGGCGTAG
CTTTGCAGCTTATGCACAGTAAAAAAACTCAGCACGCAGAGCATGAGTGGGTCATTGGTGGCGGAATTGATCAAGCTGAT
ATCGATTTTATCAGTGATACCGAGTTTGGTATTTTGCATAACAGCACACCAGAGGATGACCGTTCAGTATCACCCACAGG
ATTTTTTGATAGTGAGTCTCAAGTGAGACTAGGGGTAAAAACTTATGAACACTACCTCTACTCAGGTTACTCAGTGCGCT
TTGATGAGCGCTGGTTACTCAGTGTCTCTGGGCGCTATAACGACAGTAAAATATCGATGCATGACAGGATAGATGTTGGT
GAGGGCTCGTTAAACGGCGAGCACCATTTCAATCGTTTCAACCCAGCGTTAGGCGTTCAGTATTCTGTTTCTCAAAAATG
GGATATATCACTGAGTTACAGCGAGTCGTCACGTATGCCAAGCCCAGCAGAGCTAAGTTGTGCCGATGAAGATGACCCGT
GTAAATTACCCAATGGTTTTGTGGCCGATCCGCCATTGAATAAAGTCGTTGCGAAAACCATTGAGGCGTCAGTTGATTAT
CACACTGATGCTAATACGCTAACGGCCACTTTATATCGCACCAAAAGCGTGGATGACATTATTTTTCAACAAGCGGGTGT
GACGCAGTCAGAGGGCTACTTTATCAATGTTGATAAAACCAATCGGCAAGGGGCAGAACTGTCTTTCTTGCATCAGCGAG
AAAACCTTAGCTTTGGTGCCAATTACAGCTACTTAGACGCTACTTTCGAATCAGAATTTGTCACATTTAGTCCGAATAAT
CCCTTAGGAGGAGGTCGACAAGTGGAAGCTGGAGACACGATCCCTGGCCAGCCTCAGCATCAAGTGAAAATGCACACCGA
TTGGGCACTGAACGAAGCACTGAGTGTAGGCGCCGAGTGGTTGTTCTCATCGTCATCGTATTACCGCGGGGATGAAGCAA
ATGAGAATAAAAAAATATCGTCTTACGCGATTGCCAATGTGTATGCCAAGTATCAAGTAAGTGAGTCTGTGCAGCTTTCA
GCGCGGATCGATAACGCCTTTGACCGCCAATACCATACCTTTGGTACCTATGGTGAGCCAGACGAGGTGTTAGAGGATGT
ATACCCTGAAATTGATGAGGCTTTTTTTGTTGGCCCAGGCAGTCCAAGACGAGTAACGGCCAATGTGCAGGTACAGTTTT
AA

Upstream 100 bases:

>100_bases
TATGAATTATATGGATTGTTTTGGTTTTTTCTTTTCTTGGCGTAAGTTGTAGCAAAGGCATCTATCCGTTAATTTCCTTG
TTGAAGTGTTAACTAACGCA

Downstream 100 bases:

>100_bases
TGACTAAGCATGCTGACATTCATCGAAAATGCCGTCTTTCTGCCTTAATTGACGAGAGTAGTCATACTAAAGGAGGAAAG
AATAAAAACCAGGTGAGCAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>773_residues
MELMMRYVVAVGVMLSFEGMASEIASLETISVFGQNPLFSEHNTTSIIGSIQTISTEELAQSNALSLSQHMKNRLNSVHI
NDVQNNPFQPDVQYRGFTASPLLGLPQGISLYLNGIRFNEPFGDTVNWDLIPFAALDSVALYSGSNPSFGQNTLGGALDM
RVKNGFTFVRNELDLQIASFGQRQATVQSGGNNGRWGYYVAINRLSEDGWRDFSSSDLKQVLGTLTYQGDIHHLELFAAA
NDNALTGNGAVPEGLQVAQGYDAIYTYPDKTENDHRMFALSSESALGNGFTMQANSYYRRNNIDTTNGDDSDYEECEFNN
VVTLCEEEDDEVERVEFVGHAPEVSFSDISDVDADDIDGTLNQSATENKSYGVALQLMHSKKTQHAEHEWVIGGGIDQAD
IDFISDTEFGILHNSTPEDDRSVSPTGFFDSESQVRLGVKTYEHYLYSGYSVRFDERWLLSVSGRYNDSKISMHDRIDVG
EGSLNGEHHFNRFNPALGVQYSVSQKWDISLSYSESSRMPSPAELSCADEDDPCKLPNGFVADPPLNKVVAKTIEASVDY
HTDANTLTATLYRTKSVDDIIFQQAGVTQSEGYFINVDKTNRQGAELSFLHQRENLSFGANYSYLDATFESEFVTFSPNN
PLGGGRQVEAGDTIPGQPQHQVKMHTDWALNEALSVGAEWLFSSSSYYRGDEANENKKISSYAIANVYAKYQVSESVQLS
ARIDNAFDRQYHTFGTYGEPDEVLEDVYPEIDEAFFVGPGSPRRVTANVQVQF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA