Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109897392

GI number:

Start: 1277044

End: 1278651

Strand: Direct

Name: Not Available

Synonym: Patl_1067

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897391

Following gene: 109897393

Centisome position: NA

GC content: NA

Gene sequence:

>1608_bases
ATGTTAGACGCAAAATTAAAAGGCCAATTGGCGACTTATTTAGAAAATTTAACTTCACCCGTGGAGTTACGCATTGCTGT
TGATGAGCAACATCAAGCTAAGAAATCCGCAGAACTCACAGATTTGGCGAATGAAATAGCTGCGTTATCGCCGTTGGTCA
GCGTTGTGGCGCAAAGTAAAAGCGACATTCGAAAACCGTCGATGGAAGTGGTTTCCATAACAAATAGCACCTCAATTACT
TTTGCTGGTGTACCTATGGGCCATGAATTCACTTCATTAATACTCGCGTTATTAAACAGTGGCGGCCACCCGGTGAAAAT
CAGCGAGCAGCAAGTAGCTGAAATAAAGTCACTTTCTGGTTCATACCAATTTGAGACATACGTTTCGTTGAGCTGTCAGA
CATGCCCAGGGGTAGTGCAAGCCTTAAACGTGTTGTCTGTTATCAATCCAAATATTACTAATACCATGATTGATGGTTCA
CTGTTTCAAGAAGAAGTGACACAGCGCAATATCATGTCAGTACCAAGCGTGTATTTAAATGGCGAGCTGTTTACCCAAGG
GGCAGTGACCATAGAGAAAATTTTAAGCAAAATTGACCCTCAGGCAGATGCCAAGCAAGCCCAGTCACTCAATGACAAAG
CACCTTATGACATGCTCATTGTAGGCGGCGGTCCAGCGGGTGCAGCCGCTGCGATTTACGCAGCAAGAAAAGGCATTCGT
ACTGGTATTGTGGCCGAAAAGTTTGGTGGGCAAGTGACTGACACCATGGCTATCGAAAACTTTATTTCGGTTAAAGCGAC
TGACGGCCCTAAACTTGTGTCAGGCCTTGAGCAACACGTGAAAGATTATGATGTGGACATCATGACGAATAATAAAGCCG
TGAAGTTAACAAAAGACGGCTTGCTCAATATCGAGCTTGAGAATGGCGCATTGTTATCCAGTAAAACAGTGATGTTAGCC
ACCGGAGCAAGATGGCGTGAAATGAACGTGCCAGGCGAGCAACAATACCGCGGGGCAGGCGTTGCTTATTGCCCACACTG
TGATGGGCCGCTATTTAAAGGCAAACGCGTCGCGGTGATTGGTGGCGGTAATTCAGGTATCGAAGCGGCTCTTGATTTAG
CCAATATCGTTGAACATGTCACCGTACTCGAATTTGATAGCAAGTTGCGTGCTGATGAAGTACTTCAGCGCAAAGCAAAA
GCGGCTAACAATATCGACATTATCTTAAATGCTATGACGACAGAAGTGCAAGGCGATGGCAAACGTGTTACCGGTCTAGC
CTATCAAGACCGAGCCAGCCAAGAAAGTCATCAAGTCGAATTGGCTGGCATTTTTGTGCAAATTGGTTTGGTGCCGAACA
CCGAATGGTTAAAAGGTGATATTGCCTTAACTGCTCGAGGTGAAATAGAAGTAGGCCAACGTGGTGAAACCTCGATTGAA
GGTGTATTTGCCGCAGGTGATGTAACGACTTCGCCTTACAAGCAAATTATCATCGCCATGGGTGATGGAGCAAATGCTGC
ACTCGGTGCGTTTGATTACTTACTTAGAGCGCCGGCTGACGAAAATACCCCGTCAGTTGAAAGTAACATCGGTGAAAAGG
CAGCTTGA

Upstream 100 bases:

>100_bases
AAGGGCTGGCTAGAGTGTTCAAGCCAGCCAATTACCATCAATTAGCAAACAATTGATGGCAAAAAAGACACCGCCCATCA
TCAGTCTATTGGAGTAACCT

Downstream 100 bases:

>100_bases
ACGGTGAACGTAAGATGTAAGTTTACAACTCAAAGCGCTAACACCTAATACCTAACACCTAGCACCTTACCTCGCACCAA
GTTCATTGTGTGACACCCTT

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>535_residues
MLDAKLKGQLATYLENLTSPVELRIAVDEQHQAKKSAELTDLANEIAALSPLVSVVAQSKSDIRKPSMEVVSITNSTSIT
FAGVPMGHEFTSLILALLNSGGHPVKISEQQVAEIKSLSGSYQFETYVSLSCQTCPGVVQALNVLSVINPNITNTMIDGS
LFQEEVTQRNIMSVPSVYLNGELFTQGAVTIEKILSKIDPQADAKQAQSLNDKAPYDMLIVGGGPAGAAAAIYAARKGIR
TGIVAEKFGGQVTDTMAIENFISVKATDGPKLVSGLEQHVKDYDVDIMTNNKAVKLTKDGLLNIELENGALLSSKTVMLA
TGARWREMNVPGEQQYRGAGVAYCPHCDGPLFKGKRVAVIGGGNSGIEAALDLANIVEHVTVLEFDSKLRADEVLQRKAK
AANNIDIILNAMTTEVQGDGKRVTGLAYQDRASQESHQVELAGIFVQIGLVPNTEWLKGDIALTARGEIEVGQRGETSIE
GVFAAGDVTTSPYKQIIIAMGDGANAALGAFDYLLRAPADENTPSVESNIGEKAA

Sequences:
NA

Specific function: NA

COG id: COG3634

COG function: function code O; Alkyl hydroperoxide reductase, large subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA