Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109897323

GI number:

Start: 1189933

End: 1191573

Strand: Direct

Name: Not Available

Synonym: Patl_0998

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897322

Following gene: 109897324

Centisome position: NA

GC content: NA

Gene sequence:

>1641_bases
ATGTCGTTAAAGACGCCCTTAGAAATGATGTACCACTGGGAAGATACAACGCCGCAGAAGGTATATTTGAAGCAACCGAT
TAACGGTGCTGTTATTAGTTATACATGGGTACAGACGGCAGACAAAGTACGCCGCGCGGCAGCTGGATTAATTGCGCTGA
ACTTACCAGCGGGTAGCCACATTGCCGTATTATCTAAGAACTGTGCTGAATGGTTCATTGCTGACTTAGCTATTATGTTG
GCCGGTCATATATCCGTACCAATTTATTCAACAGCCGGCGAGAAAACGATTCAATATGTATTAAATCACGCAGCATGTCC
TGTTATTTTTGTGGGCAAGTTAGATGATACTGCTGAGCAAGTAGCAGCGATCCCTGAGGGCGTTACTAAGCTAGCATTTT
CTTATCCTGGTATTGAAGCCGATAAGGATTGGGATTCATTGATGGCAAATGAGCCCTATTTAGAGCGCCCAGTACCCGAT
ATGAGCAGCACTATGACGATTATCTATACGTCGGGCAGCACGGGTAACCCTAAAGGTGTAGTGCATACCTATAATTCGAT
TAGTTGGGCTGCGAGCAATTCAAGAAATGAATTAAGCGTTGGCGATGAAGACCGTATATTGAGTTACTTGCCATTGGCGC
ATATCACCGAGCGCGTTTTGGTGGAAATGGCTAGTTTCTACGCAAACACTCAAATTGGTTTTATAGAGTCGCTTGATACA
TTCAATCGCGATATTTGCCACCTAAGGCCTACGTTATTTATTTCTGTTCCGCGTCTTTGGACTCGTTTTCAAATGGGGGT
TTTAGCAAACATGCCCCAAAAGAAACTCGATTTTCTGCTGAAAATACCGTTTGTCGGCAATATAGTCGCGAGTAAGATTA
GAACTAAACTTGGCTTAGATAAGGCTCGTATGTGCGCCAGTGGATCCGCTCCTATTTCGCCAGCCACCCTTAAATGGTTT
TTGAAAGTAGGCGTTAAAATATCTGAAGGATGGGGAATGACAGAAAACAGTGCTTACGGTACCTGTTGTGTTCCATTTAG
AGAGGACAAAATTGGTAGTATTGGCCGCGCTTATGAAGGTGTCGATATTAGAATTGGCGAAGAGGGCGAGATACAAGTTA
AAGGGCCTTGTAATATGCAGGAATATTATCTGGAGCCTGAAAAAACCGCTGAAACCTTTACCGAAGACGGATACTTGCGC
ACAGGTGATAAGGGCGCAATCGATAGCGATGGCTATATTAAAATTACCGGGCGCTTAAAAGAGATATTTAAAACAGCCAA
GGGTAAGTATATCGCGCCAGTACCGATTGAAGCTCTCATTATGGGCAACTCTTCTGTAGAGCAAGTCTGTGTCACCGGCT
CGCAATTAAAACAGCCTATTGCGTTAGTCGTATTATCAGAAGATGCCACCAAACAAGACAAAGACAAAGTAGAAAAGAGC
CTGTTAGCAACCTTGGAATCGGTTAACGCTGGTTTAGAAAGTCACGCAGTACTCGACCGTTTAGTGATCATGAAAGATGA
TTGGACTGTAGAGAACGGACTACTAACCCCTACGCTAAAGATAAAGCGCCATTTACTGGAAGAAAAATACGATGGACTAA
TTAACGCTCCCGAGAGAGAAAAGTTAATTTATCAAAAATAG

Upstream 100 bases:

>100_bases
TACGCAAAATAAATGCTTAAGTCTTATAGTTGTTTGACCTGTGGGGTTTCAATCGTTATAACGTTGTTATCAAAATGTAG
ATTTATGTACTGGAGACAAC

Downstream 100 bases:

>100_bases
ATCACGCCCGCTTTAACCGCCCCTTTATGTGTAAAGTCATCTATAGAATGTGAGTAACACGTAGAGGGGCTCTCCTAAAT
ACCTTATCACCACCATACTA

Product: AMP-dependent synthetase and ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>546_residues
MSLKTPLEMMYHWEDTTPQKVYLKQPINGAVISYTWVQTADKVRRAAAGLIALNLPAGSHIAVLSKNCAEWFIADLAIML
AGHISVPIYSTAGEKTIQYVLNHAACPVIFVGKLDDTAEQVAAIPEGVTKLAFSYPGIEADKDWDSLMANEPYLERPVPD
MSSTMTIIYTSGSTGNPKGVVHTYNSISWAASNSRNELSVGDEDRILSYLPLAHITERVLVEMASFYANTQIGFIESLDT
FNRDICHLRPTLFISVPRLWTRFQMGVLANMPQKKLDFLLKIPFVGNIVASKIRTKLGLDKARMCASGSAPISPATLKWF
LKVGVKISEGWGMTENSAYGTCCVPFREDKIGSIGRAYEGVDIRIGEEGEIQVKGPCNMQEYYLEPEKTAETFTEDGYLR
TGDKGAIDSDGYIKITGRLKEIFKTAKGKYIAPVPIEALIMGNSSVEQVCVTGSQLKQPIALVVLSEDATKQDKDKVEKS
LLATLESVNAGLESHAVLDRLVIMKDDWTVENGLLTPTLKIKRHLLEEKYDGLINAPEREKLIYQK

Sequences:
NA

Specific function: NA

COG id: COG1022

COG function: function code I; Long-chain acyl-CoA synthetases (AMP-forming)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA