| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
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Identifier: 109897159
GI number:
Start: 976664
End: 979603
Strand: Direct
Name: Not Available
Synonym: Patl_0832
Alternate gene names: NA
Gene position: NA
Preceding gene: 109897156
Following gene: 109897160
Centisome position: NA
GC content: NA
Gene sequence:
>2940_bases ATGTCTTTGCGTCTCCTTTTTTTATGCCTAGTTTGTAGTTTCGCTTTAAATGTAAATGGACAAATTAAAACCGTTGAAAC GACTTCTGTTAGCTCGCGAGAGAATATAAACATTGGTTGGCGCTATCACAAAGGGGAGACGGCGCGCCCACCAAGCAGCA AGCAATGGTCTGCTGAAGACTGGCAAGAGGTCAACCTTCCGCACAGTTATGCCCTGACTTCGATTAACTTAGATAACAGC GACGATGATAAGTCACAGCAAACATTTCATCGCGATATTAGCTTTTATGAGCGAGCGCTAACCATCAAAGGAAACCAAGG CAGTAAGGTCTATCTCGAATTTGAAGGGGCACATCAGAAAACCCGTTTGTGGGTTAATGGGCAATATGTGGGTGAACATG CGGTAGGCGCCTACACACCATTTCATTTTGATATATCTGAATTTGTTACCTTGGGTCAAACAAATACTCTTACCCTTGAG TTAGATAATCGACGTAATAAACAGATTCCGCCTGATGGCCATACGACTGATTACGTGCTGTTTGGTGGCCTTTACCGAGA TGTTTATTTAAATGTATTAGACCCTCTGCATTTTACTTTCGATTGGGACTCAAGCACCTCAGGGATTTTTGTCACCACCC CGACAGTAACAAAAAGGGATGCGACGGTCACCGTACGAAGCGAGGTGGTCAATACAGGAGATAGCCCGCGTAAGTTCTTT GTGCAAACCTATATTGTTGACCATCAGGCAATCATCATTCAAAGAAAGCGTACAGCACATACCCTAGGTTCGGGGGCCAC GCATTTGGTAAAACACACCAGCGGCATCGACCAAAACTTACGTCTTTGGTCACCAGACAGTCCCTACTTATATAAGGTGA TCAGTCAGGTACTTGATGAAGAAGGAAGGGTACTGCACAGCAAAACGAATCCTCTGGGGATCCGCAAATTTGAGCTAGTG CTAGATAAAGGTCTCGTGCTCAACGGTGAACCCATTGACATTATCGGAGCGAATCGTCATCAGCATTTCCCCTATATAGG GGATGCAGTGCCAAATAATCTGCATCGTTTGGACGCGTTAAAATTCAAGCGCTCGGGTATGAATTTAGTGCGCTTGGCCC ATTACCCCCACGATAATGCATTTTTGCAAGCATGCGATGAGCTCGGATTAATCGTGGTCGAAGAGCCTCCTACATGGATA GGTATGGGAGATAAACTGTGGATGGCACGATTAGAAGAGGCCACACGTCGAATGATACGAAATCACCGAAATCACCCGTC AGTGTTAGGCTGGGGAGCGGGTATCAACCACAGAGGTACAATCAAGCGCCTACATTATGCCGTTAAAGAAGAAGACCCTA CGCGCATCAGCATGAACAATGGCACCTTATGGACAGGGGAGCAACACTCGGGTATTACAGACTTATATGCAGTAATGGAT TACCGTGGAGCGAAGCGCCAATCGGACGATCTACTCTTTGCCATGGAGCACTCGGGCTCCACTGATAGTCTTTCGCTGCA AGAGATAGTATCTCGTTACAAAGGGGACCCAAACCTAATCGGGTTAGCCTCTTGGAGCGCCCATGACAGCCAATCTTTTA TAAAACGCGATGAGCAATATCCAAATTTATCTGTGTGGCAAGCGTCAAGCTCGGATGCATTCCGTTTACCCAAACCGAAT TACTATTGGTATCAATCAGAGCTTACCTCTGAGCCTATGGTACATATTGCTGACACGCGTGGTCAGTTTGACGATCAGGT GCAGGTGTTCACCAATGCCGCAGAAGTGGAGTTATTGCATAACGATCGCTCATTAGGTCGTTATCAAGCCAAGCGTACAG AGCAAAACAAGTATCTTAATTCACCTTCTATTTTAATCCCGTTTAAGTGGCAAAGCGGCACATTAACTGCCATTGCCTAC CAAAACGACGGCGAACTCGTTGTGGCGAAGCACCAAAGAGCCAAGGGTACTCAACCTGCCAAACTAGATGTAGTGTTCGA TACCGCAGGGTTTGACATGACAGCAGATGGCTCAAGTATCATTCTTGCCTACGCAAAAATCACCGACAATCAGGGAGGCT TGATTGACAAGGATACCCCTAAGGTTAGGTTTGAACTGCAAGGGGACGGCCAGATCATTGGTGATGAAACCATTGGTGCT AATCCTGTTGCTTGGCGTAATGGCCACGCACCCATAATGATTCAAGTCGGCTCCACGGCCAGCGTTTTAACATTGAGCGC TTATGCCGACGGTTTGCAAACCGGCAGTGCTAGCGTGGCGCTAAATGAAGTAAGCCAAACACACTCAAAGAACGATTCAA GCCGTGTACTTGACCCCTTAGCGCTGTATGTCGACTTTGGTAATCAAGAACAACACCCGCAAGAAAACTTTTACATCTGG TCTCATCAATCAGGTGATGACTCTCGCGTCGTGACAGCCGCCAATGGGCAAAAGGTAACAATAGCGTTATCGGGGTCAAC GGAGCCACTTACGTGGGATAACACATGGGGAGTGCCTGGTGATCTGAGCTTTCTAATCGAAGATGGGGTAAATAACGCCA AGGGGCAACCCATTAAGCTGCACTTTGGTCAGTTACCTCAAGGGCAATATGTGCTGCAAACTTGGCATCACATGCTAAGC GATGACGGTGATGCCATTCGCCCCCTGAATTTTAGCATGCCCAATAACACTGATGCCCAAAGCGTAGATGGTTATCGCCC CACATTTGGTAAGCGTATCGCTATTACAGAAGCTGGAGGCGGAGAAAGAGGTGACGGTGGTTCAAATAAAGGGGCTGCAG GGTTCGCACGACACACCTTTACGGTAAACGAGGGAGGTGAAGCAACGTTGCTCATGGCCGCTCCTGATGGCAATCAGCAA ATACGTCTTAACGGTTTTGGTCTTACTCAATTAGTTCCAGGAGCTACCAATGGGTATTAA
Upstream 100 bases:
>100_bases AGAACAAGTAATACGCACCTATTTATCATATATAAATGTTAACAATTGCATTTGAATCATGTATTGTCGGTTAATTGTTT GGTTAATATAAGGTTGCATC
Downstream 100 bases:
>100_bases TATCAAAACCCTATTGTGTTGTTGTAGCCTGTTGATGATGCTTGGGTCAGCCATCGCCCAGACCAATACTGATTCGTCGT CGAGAAATACAATCGAAAAG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>979_residues MSLRLLFLCLVCSFALNVNGQIKTVETTSVSSRENINIGWRYHKGETARPPSSKQWSAEDWQEVNLPHSYALTSINLDNS DDDKSQQTFHRDISFYERALTIKGNQGSKVYLEFEGAHQKTRLWVNGQYVGEHAVGAYTPFHFDISEFVTLGQTNTLTLE LDNRRNKQIPPDGHTTDYVLFGGLYRDVYLNVLDPLHFTFDWDSSTSGIFVTTPTVTKRDATVTVRSEVVNTGDSPRKFF VQTYIVDHQAIIIQRKRTAHTLGSGATHLVKHTSGIDQNLRLWSPDSPYLYKVISQVLDEEGRVLHSKTNPLGIRKFELV LDKGLVLNGEPIDIIGANRHQHFPYIGDAVPNNLHRLDALKFKRSGMNLVRLAHYPHDNAFLQACDELGLIVVEEPPTWI GMGDKLWMARLEEATRRMIRNHRNHPSVLGWGAGINHRGTIKRLHYAVKEEDPTRISMNNGTLWTGEQHSGITDLYAVMD YRGAKRQSDDLLFAMEHSGSTDSLSLQEIVSRYKGDPNLIGLASWSAHDSQSFIKRDEQYPNLSVWQASSSDAFRLPKPN YYWYQSELTSEPMVHIADTRGQFDDQVQVFTNAAEVELLHNDRSLGRYQAKRTEQNKYLNSPSILIPFKWQSGTLTAIAY QNDGELVVAKHQRAKGTQPAKLDVVFDTAGFDMTADGSSIILAYAKITDNQGGLIDKDTPKVRFELQGDGQIIGDETIGA NPVAWRNGHAPIMIQVGSTASVLTLSAYADGLQTGSASVALNEVSQTHSKNDSSRVLDPLALYVDFGNQEQHPQENFYIW SHQSGDDSRVVTAANGQKVTIALSGSTEPLTWDNTWGVPGDLSFLIEDGVNNAKGQPIKLHFGQLPQGQYVLQTWHHMLS DDGDAIRPLNFSMPNNTDAQSVDGYRPTFGKRIAITEAGGGERGDGGSNKGAAGFARHTFTVNEGGEATLLMAAPDGNQQ IRLNGFGLTQLVPGATNGY
Sequences:
NA
Specific function: NA
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA