| Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
|---|---|
| Accession | NC_008228 |
| Length | 5,187,005 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 109897050
GI number:
Start: 816009
End: 818609
Strand: Direct
Name: Not Available
Synonym: Patl_0723
Alternate gene names: NA
Gene position: NA
Preceding gene: 109897049
Following gene: 109897051
Centisome position: NA
GC content: NA
Gene sequence:
>2601_bases ATGAAGCCAGACCTACCCAGTGTGGATATGCTCAAAGATGTGCGCTTGCAAACGCCGATGCGCGTTTACACCCAAGATGG GAAGTTGATTTCACAGTTCGGGGTGAAACGCCGTATTCCGCTTACCATTGAAGACGTGCCACAGGATTTAATTAATGCTG TTTTGGCCACAGAGGACAGCCGTTTTTATCAACATCCAGGGGTTGACCCTATCGGTATGGCGCGAGCTGTGGTCAACCTT ATTTTGACTGGAGAGAAGGGACAGGGCGGTAGTACGTTAACCATGCAGTTGGCGCGAGGTTTCTTTTTAACGAGAGATAA AACATATATACGCAAAATTAAAGAAATCTTTATCGCTTGGCACATGGAGCAATTGCTCACCAAACAAGAAATTTTAGAAC TGTATCTAAACAAAGTTGAACTAGGTCATCGTGCTTTTGGTTTTGGTGCAGCCGCCCAAGTTTACTACGGCAAAACGGTA AACCAGCTAACGCTTGCACAAATGGCAACCATCGCTGGGTTACCGCAAGCACCATCAGTCCTTAACCCTATCAGTCGTCC AGATCGCTCCAAAATTCGCCGTCGTGTGGTTCTGCTGCGTATGTTGGATGAGAAATACATTACTCAGGCTCAGTTCGATG AAGCGGTAAATGCACCGATTACGGCAAAAAAACATGGTGCCGAAATCGAATTCTCAGCACCTTATTTGGCGGATTTAATT TGGAATGAAATGGTCGAGCTGTATGGCAAAGAAGAAGCGGAAACTGGCGGTTATCAGGTTTACGCCACCGTACCTTCTGC CACTCAGTTAGCGGCGCAAAAAGCGGTTCAGCGAAACTTACATGACTATGATGAGCGCCATGGTTATCGCGGAGTTGAAC AACAACTTTGGGTTCCCGCTGAGTTACCCGTCAAGCCTGAGGACACTGCTGGGTCACAGACCGCCCCCGCTATTTCTAGT GAACCATGGGATGAAGAGAAAATGCTGAGCTTCCTTGAGGAGTATCAAACATTTGAGTCTATGCAGCCAGCAATCGTAGC CAAAGTGAATGACAAAGACATAACCATTTTCACTCGCTCAGGTCGCTACAGTGTTATTGATTGGGATGGACTAGATTGGG CGCGTAAATACATAACAGATACTAGGCAGGGCAATGAGCCTGAGAAAGCCAGTGATATAGTCTCGGAAGGTTCGCTGATT CTTATTCGCCAGCGAGAAGACGATAAACATTGGCAACTTACCCAGTATCCAGATGCCAGTAGCGCCTTTATTGCATTAAA CCCTCACAACGGCGCTGCGCAGGCGGTGATCGGCGGCTACAGTTTTTACCAAAGTCAGTTTAATCGAGCGACACAAGCTA AGCGGCAAGTGGGCTCGAACATCAAACCTTTCATTTATTCTTCGGCGTTAGCCAATGGCTTTACCTTAGCTAGCATTATT AATGATGCCCCGATTAACCAATGGGAGCGCGGAACGGGCAATGCTTGGCGTCCTGAAAACTCGCCACCAGAATATGATGG GCCAATTCGATTGCGGGTTGCCTTAGGAAAATCAAAGAACGTGGTGTCAGTGCGCTTAGTGCGTGCTGTGGGGCTTGAAA AAGTACGCCAGCACTTGTCGCGGTTTGGTTTCGATTTATCAGAAATACCCAAAGATGAAACTGTGTCTTTAGGTTCGGGT TCACATACGCCATTGGAAGTGGCGACAGCACTGTCCGTGATTGCCAATGGTGGCTTTTTAATTCAGCCGCATTTTGTTGA GCGCATTGAAGATGATTACGGAAAAGTGCTTTGGAAATCCAATCCAGTGCAAGCTTGTGACCCCTGTGGTGATGCTGATG AAGATGCAGCCGAACCTGAGCCTGAACAGATGATGGACATTGAAGCCATGCTTGCAGCTGAATTAGGCTCAGGGCAATTT GGGCAAAGCGAGGCGATGCCAGCACAAAGTAGTGACTCCGCCGATGCACCTGCACCGATCCGCTCGGCCCCAAGGGTGCT GGACGAAGACAACGCATTCTTAGTGGCAGAAATGATGCGCACAGCCGTAAAAACCAATGGTAATTGGAATAAGAAGACCT ATTGGCAAGGTACGGGCTGGCGGGCAAGTAATTTGCTTCAAAGAGCGGATATAGCAGGAAAAACCGGTACCACTAATGAT TCAAAAGATACTTGGTTTAGTGGCTTTACCAACGATTTAGTAGCGACAGTTTGGGTGGGCTTTGATGATATGAGTCGCAG TTTAGGACGCGCCTCACGCAACCAAAACTTGGTTAACAAGAACCCACAGAAATTTAATTTCATTGGCAACGCCATGATAG GTGGCGAAGATGGCGCTAAAGCGGCTGAGCCCGCTTGGATCCGCTTTATGCAACAAGCGTTAGACGGGGTGCCTGAAAAG AAACGTCCTATGCCGACGGATTTGGTGACTACACGAATTGACCTTGCTAGTGGTAAATTAACTCAGCGCACTGATCATAC GTCAATGTTTGAGTATTTTATGCAAGGTACGGCTCCTACAAGCTATGTGAGCGACAGCGAATTTGTCGACCCAGCTGAAG AAAGCAGTGAACAAAGCAAACCACTTGAAGACATTTTTTAA
Upstream 100 bases:
>100_bases TGGTAATATTGTTTTCGTGAAGTTTTTAAAATCCGCATTTTTGATCCTTATCCTTGCTTTTGTCGTCGGTGTCGTCACGA CTTTTGCCCTGTATTTTTAC
Downstream 100 bases:
>100_bases GGCATCATAGTCTCCATCAGAAAACGCAGGTAGCTACGCAAAGTGGTTGCTAAGTGTTTTCGTCAGAAATGCTGCTAAGT GAGTCGGTGTGTATTGATAT
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>866_residues MKPDLPSVDMLKDVRLQTPMRVYTQDGKLISQFGVKRRIPLTIEDVPQDLINAVLATEDSRFYQHPGVDPIGMARAVVNL ILTGEKGQGGSTLTMQLARGFFLTRDKTYIRKIKEIFIAWHMEQLLTKQEILELYLNKVELGHRAFGFGAAAQVYYGKTV NQLTLAQMATIAGLPQAPSVLNPISRPDRSKIRRRVVLLRMLDEKYITQAQFDEAVNAPITAKKHGAEIEFSAPYLADLI WNEMVELYGKEEAETGGYQVYATVPSATQLAAQKAVQRNLHDYDERHGYRGVEQQLWVPAELPVKPEDTAGSQTAPAISS EPWDEEKMLSFLEEYQTFESMQPAIVAKVNDKDITIFTRSGRYSVIDWDGLDWARKYITDTRQGNEPEKASDIVSEGSLI LIRQREDDKHWQLTQYPDASSAFIALNPHNGAAQAVIGGYSFYQSQFNRATQAKRQVGSNIKPFIYSSALANGFTLASII NDAPINQWERGTGNAWRPENSPPEYDGPIRLRVALGKSKNVVSVRLVRAVGLEKVRQHLSRFGFDLSEIPKDETVSLGSG SHTPLEVATALSVIANGGFLIQPHFVERIEDDYGKVLWKSNPVQACDPCGDADEDAAEPEPEQMMDIEAMLAAELGSGQF GQSEAMPAQSSDSADAPAPIRSAPRVLDEDNAFLVAEMMRTAVKTNGNWNKKTYWQGTGWRASNLLQRADIAGKTGTTND SKDTWFSGFTNDLVATVWVGFDDMSRSLGRASRNQNLVNKNPQKFNFIGNAMIGGEDGAKAAEPAWIRFMQQALDGVPEK KRPMPTDLVTTRIDLASGKLTQRTDHTSMFEYFMQGTAPTSYVSDSEFVDPAEESSEQSKPLEDIF
Sequences:
NA
Specific function: NA
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA