Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109897050

GI number:

Start: 816009

End: 818609

Strand: Direct

Name: Not Available

Synonym: Patl_0723

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897049

Following gene: 109897051

Centisome position: NA

GC content: NA

Gene sequence:

>2601_bases
ATGAAGCCAGACCTACCCAGTGTGGATATGCTCAAAGATGTGCGCTTGCAAACGCCGATGCGCGTTTACACCCAAGATGG
GAAGTTGATTTCACAGTTCGGGGTGAAACGCCGTATTCCGCTTACCATTGAAGACGTGCCACAGGATTTAATTAATGCTG
TTTTGGCCACAGAGGACAGCCGTTTTTATCAACATCCAGGGGTTGACCCTATCGGTATGGCGCGAGCTGTGGTCAACCTT
ATTTTGACTGGAGAGAAGGGACAGGGCGGTAGTACGTTAACCATGCAGTTGGCGCGAGGTTTCTTTTTAACGAGAGATAA
AACATATATACGCAAAATTAAAGAAATCTTTATCGCTTGGCACATGGAGCAATTGCTCACCAAACAAGAAATTTTAGAAC
TGTATCTAAACAAAGTTGAACTAGGTCATCGTGCTTTTGGTTTTGGTGCAGCCGCCCAAGTTTACTACGGCAAAACGGTA
AACCAGCTAACGCTTGCACAAATGGCAACCATCGCTGGGTTACCGCAAGCACCATCAGTCCTTAACCCTATCAGTCGTCC
AGATCGCTCCAAAATTCGCCGTCGTGTGGTTCTGCTGCGTATGTTGGATGAGAAATACATTACTCAGGCTCAGTTCGATG
AAGCGGTAAATGCACCGATTACGGCAAAAAAACATGGTGCCGAAATCGAATTCTCAGCACCTTATTTGGCGGATTTAATT
TGGAATGAAATGGTCGAGCTGTATGGCAAAGAAGAAGCGGAAACTGGCGGTTATCAGGTTTACGCCACCGTACCTTCTGC
CACTCAGTTAGCGGCGCAAAAAGCGGTTCAGCGAAACTTACATGACTATGATGAGCGCCATGGTTATCGCGGAGTTGAAC
AACAACTTTGGGTTCCCGCTGAGTTACCCGTCAAGCCTGAGGACACTGCTGGGTCACAGACCGCCCCCGCTATTTCTAGT
GAACCATGGGATGAAGAGAAAATGCTGAGCTTCCTTGAGGAGTATCAAACATTTGAGTCTATGCAGCCAGCAATCGTAGC
CAAAGTGAATGACAAAGACATAACCATTTTCACTCGCTCAGGTCGCTACAGTGTTATTGATTGGGATGGACTAGATTGGG
CGCGTAAATACATAACAGATACTAGGCAGGGCAATGAGCCTGAGAAAGCCAGTGATATAGTCTCGGAAGGTTCGCTGATT
CTTATTCGCCAGCGAGAAGACGATAAACATTGGCAACTTACCCAGTATCCAGATGCCAGTAGCGCCTTTATTGCATTAAA
CCCTCACAACGGCGCTGCGCAGGCGGTGATCGGCGGCTACAGTTTTTACCAAAGTCAGTTTAATCGAGCGACACAAGCTA
AGCGGCAAGTGGGCTCGAACATCAAACCTTTCATTTATTCTTCGGCGTTAGCCAATGGCTTTACCTTAGCTAGCATTATT
AATGATGCCCCGATTAACCAATGGGAGCGCGGAACGGGCAATGCTTGGCGTCCTGAAAACTCGCCACCAGAATATGATGG
GCCAATTCGATTGCGGGTTGCCTTAGGAAAATCAAAGAACGTGGTGTCAGTGCGCTTAGTGCGTGCTGTGGGGCTTGAAA
AAGTACGCCAGCACTTGTCGCGGTTTGGTTTCGATTTATCAGAAATACCCAAAGATGAAACTGTGTCTTTAGGTTCGGGT
TCACATACGCCATTGGAAGTGGCGACAGCACTGTCCGTGATTGCCAATGGTGGCTTTTTAATTCAGCCGCATTTTGTTGA
GCGCATTGAAGATGATTACGGAAAAGTGCTTTGGAAATCCAATCCAGTGCAAGCTTGTGACCCCTGTGGTGATGCTGATG
AAGATGCAGCCGAACCTGAGCCTGAACAGATGATGGACATTGAAGCCATGCTTGCAGCTGAATTAGGCTCAGGGCAATTT
GGGCAAAGCGAGGCGATGCCAGCACAAAGTAGTGACTCCGCCGATGCACCTGCACCGATCCGCTCGGCCCCAAGGGTGCT
GGACGAAGACAACGCATTCTTAGTGGCAGAAATGATGCGCACAGCCGTAAAAACCAATGGTAATTGGAATAAGAAGACCT
ATTGGCAAGGTACGGGCTGGCGGGCAAGTAATTTGCTTCAAAGAGCGGATATAGCAGGAAAAACCGGTACCACTAATGAT
TCAAAAGATACTTGGTTTAGTGGCTTTACCAACGATTTAGTAGCGACAGTTTGGGTGGGCTTTGATGATATGAGTCGCAG
TTTAGGACGCGCCTCACGCAACCAAAACTTGGTTAACAAGAACCCACAGAAATTTAATTTCATTGGCAACGCCATGATAG
GTGGCGAAGATGGCGCTAAAGCGGCTGAGCCCGCTTGGATCCGCTTTATGCAACAAGCGTTAGACGGGGTGCCTGAAAAG
AAACGTCCTATGCCGACGGATTTGGTGACTACACGAATTGACCTTGCTAGTGGTAAATTAACTCAGCGCACTGATCATAC
GTCAATGTTTGAGTATTTTATGCAAGGTACGGCTCCTACAAGCTATGTGAGCGACAGCGAATTTGTCGACCCAGCTGAAG
AAAGCAGTGAACAAAGCAAACCACTTGAAGACATTTTTTAA

Upstream 100 bases:

>100_bases
TGGTAATATTGTTTTCGTGAAGTTTTTAAAATCCGCATTTTTGATCCTTATCCTTGCTTTTGTCGTCGGTGTCGTCACGA
CTTTTGCCCTGTATTTTTAC

Downstream 100 bases:

>100_bases
GGCATCATAGTCTCCATCAGAAAACGCAGGTAGCTACGCAAAGTGGTTGCTAAGTGTTTTCGTCAGAAATGCTGCTAAGT
GAGTCGGTGTGTATTGATAT

Product: 1A family penicillin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>866_residues
MKPDLPSVDMLKDVRLQTPMRVYTQDGKLISQFGVKRRIPLTIEDVPQDLINAVLATEDSRFYQHPGVDPIGMARAVVNL
ILTGEKGQGGSTLTMQLARGFFLTRDKTYIRKIKEIFIAWHMEQLLTKQEILELYLNKVELGHRAFGFGAAAQVYYGKTV
NQLTLAQMATIAGLPQAPSVLNPISRPDRSKIRRRVVLLRMLDEKYITQAQFDEAVNAPITAKKHGAEIEFSAPYLADLI
WNEMVELYGKEEAETGGYQVYATVPSATQLAAQKAVQRNLHDYDERHGYRGVEQQLWVPAELPVKPEDTAGSQTAPAISS
EPWDEEKMLSFLEEYQTFESMQPAIVAKVNDKDITIFTRSGRYSVIDWDGLDWARKYITDTRQGNEPEKASDIVSEGSLI
LIRQREDDKHWQLTQYPDASSAFIALNPHNGAAQAVIGGYSFYQSQFNRATQAKRQVGSNIKPFIYSSALANGFTLASII
NDAPINQWERGTGNAWRPENSPPEYDGPIRLRVALGKSKNVVSVRLVRAVGLEKVRQHLSRFGFDLSEIPKDETVSLGSG
SHTPLEVATALSVIANGGFLIQPHFVERIEDDYGKVLWKSNPVQACDPCGDADEDAAEPEPEQMMDIEAMLAAELGSGQF
GQSEAMPAQSSDSADAPAPIRSAPRVLDEDNAFLVAEMMRTAVKTNGNWNKKTYWQGTGWRASNLLQRADIAGKTGTTND
SKDTWFSGFTNDLVATVWVGFDDMSRSLGRASRNQNLVNKNPQKFNFIGNAMIGGEDGAKAAEPAWIRFMQQALDGVPEK
KRPMPTDLVTTRIDLASGKLTQRTDHTSMFEYFMQGTAPTSYVSDSEFVDPAEESSEQSKPLEDIF

Sequences:
NA

Specific function: NA

COG id: COG5009

COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA