Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 109896480

GI number:

Start: 177901

End: 180309

Strand: Direct

Name: Not Available

Synonym: Patl_0149

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896479

Following gene: 109896481

Centisome position: NA

GC content: NA

Gene sequence:

>2409_bases
ATGTTTAAACGAAACACACAAAAATTTCGCCTATGCGCAATAAGTGCTGCGGTGATGGGACTGATCAGTACAGGGGCGAT
GGCACAGCAAACAAGCGCTGCTCAAAACAAAGCTCAAGAAGAAGATGTAGAGCAAATCATTGTCACGGCGACAAAGCGCG
CAGAGTCAATCGGCGATATTCCATTTTCAATCAATGCGCAAACCCAGAAGGACTTTGAACGAAGTGGTGCTAGTAATTTA
GAAGATATTGCTCGCAACGTCGCGAGTGTGGCAATTCAAAATCTTGGCCCCGGACAAAGCCAAGTATCCATGCGCGGTGT
ATCTGCAGGGCAAATCGTACGTGACCAGCCGGGCGTGAAAGAGCAGGTGGGCGTTTATTTGGATGAAAGTGTTATTTCTC
TATCGTTATTTACCCCTGACTTAGACTTATTTGATTTAAATCGTATAGAGACGCTGCGCGGCCCGCAAGGTACGCTATTT
GGCTCAGGCTCAATAGGTGGAACGTTACGCTATATTACTAATCAACCTGAACTAGACACGTTCGAGGGTAAATTTGAAGC
GAACCTGAATTCAGTATCAGACGGTGGCACCGGCGGCAATGTGAAAGGTATGGTAAACCTGCCTATCTCAGATTCTGTCG
CTATGCGCGCGGTGGTTTATCGCACTGAATATGCGGGTTTTATTGACGCATACGGTCCTGATGATGCGTTTAAAGAAGAT
GTTAACGACGGAGACAGAACCGGTGGTCGAGTGGCGTTTGTTATCAGCCCAAATGACAAACTCACTATTACCCCGCGGAT
CATATTTCAAGAGCTCGAAATAAATGGCTTTAATAGACAAGACGCGTTCAATATTTTCGCCAACCCTTACACCACAACGT
GGCCAGCGAAACAATTAAAAGATAGAGAGCAGTTCTTACTATTAGAAGAAGGCTTTTCTGACGATACGCTGATAGCTGAT
TTGACCGCAGAGTATCAAGCTGAGATTGCTGACTTTACCTTTGTCTACAGCTACACAGACCGAGATATTCTGGTGAGCCG
AGATGCGAGCGCACTGTCTGGCTCAGTGAGTGTTGATTTAGGTTTCCCTGATGCGGCCGTCACGCTGCCATCGAACCTAC
TCGATCGTACAGAAGTGGAGCAAGACACGTTCGAGCTGCGCGCAGCATCAAACGATGACGGCGCGTTAGATTGGATAGTC
GGCGCGTTTTATTCTTCAACTGACCGAACGTACAAACAAACACTACCCACACCTGGATACGATAGCTTTACCGATGCGAC
CTTAGGTGCAGGTACTTCAGCGGCGGTAGCCAATGGGTTTGATGTCGATTCTCCTTACAACGCTTTCTTGCCTTACGATC
TGACACAGTTAGCTATTTTCGGTGAAGTTAATTATCAAGTGAACGACGATCTTAAAGTGACTGCAGGTTCGCGTTTTTAT
GATTACGAAGAAGAGCGTCAGTTTATTTCAGGCGGCTTGTTCGCCAATGGTGACAATCAAACCGATGCAACTGAATCTGA
TGGCTTTACGTCACGTATTCTTGGTCAATATCGCTTGAACGATAACGTGAACATTAACGCGCAGATTTCTGAAGGGTTTA
GGTTAGGTGGGGTAAACGATCCATTGAACAGAAGCTTGTGTTCTGATCAGGATGAGGCGATTTTTGGTTCATTCCAAGAT
TATGAAGATGAGCAGTTAACCAACTATGAGTTAGGCTTCAAATCTTCTGGCCGCGGCTGGAGCGCAAACGTGTCAGCGTT
TTACAATGATATCGAAGACTTACAGGTGACGTTAGATGCAGGCTCTTGTTCTTCTCGAGTGTCGTTTAATGTGCCTGATG
CCCACACGCAAGGCCTTGAATTTGAGCTTACACGCCAGTTCACAGATCAATTATTCTTCTCTCTTAGCGGTAGCATTATA
GAAGCAGAATTTGACTCAACCGTGGTTGATGGCTCTGGTGCGGTACTCGGTGGGGTAGAAGATGGCAACCGGTTGGCGTC
AGTGCCTGAAGAAAGTTTCTCGATTTCGTTTACTTACGATCTCGCTTCGCCTTTGTTCTCTTCAAATAGCACTTATTTCC
AAGGCTCATACCAGTACGTTGGTGATCGAATCACTCAACCTAGCGACCAAGTCGCTGGTGCGGGCACGTTTGTTTCTGGT
TTGGCCTTTGGTGGAGCAACGGGTCAGGAAACCACCGAATTAGATTTGGTGCTTGATGCCTACGGCACCATGAATCTTAG
CTTTGGTTTAGCCTATGATGATTACGAAATTTTGTTGTATGCCAATAATGTGTTTGATGAAAATGCGTTGTTGTCATTGG
ACAGAGAGCGTGGAGGTCGGGCTCGACTCGGTTTTACGACCAACCAACCTAGAACAATTGGTGCTACATTCCGTTACTTC
TTTGAGTAA

Upstream 100 bases:

>100_bases
TAACAACATATCGTCGGTAAGCAGTAGAAATGCCCAACTTTTTTTGCCACATTACACGACGGTTATTAACAAAAAAACAA
CAATCAATCTGGATGGACAC

Downstream 100 bases:

>100_bases
TATTTGTTAGTTATATACTCAAAAAATAATCAGCAGCTAAACATCAATCGACGTTTAGCTGCGCATTCTCCTCTCTATTT
CCTGTGAAATATCAAATCGA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>802_residues
MFKRNTQKFRLCAISAAVMGLISTGAMAQQTSAAQNKAQEEDVEQIIVTATKRAESIGDIPFSINAQTQKDFERSGASNL
EDIARNVASVAIQNLGPGQSQVSMRGVSAGQIVRDQPGVKEQVGVYLDESVISLSLFTPDLDLFDLNRIETLRGPQGTLF
GSGSIGGTLRYITNQPELDTFEGKFEANLNSVSDGGTGGNVKGMVNLPISDSVAMRAVVYRTEYAGFIDAYGPDDAFKED
VNDGDRTGGRVAFVISPNDKLTITPRIIFQELEINGFNRQDAFNIFANPYTTTWPAKQLKDREQFLLLEEGFSDDTLIAD
LTAEYQAEIADFTFVYSYTDRDILVSRDASALSGSVSVDLGFPDAAVTLPSNLLDRTEVEQDTFELRAASNDDGALDWIV
GAFYSSTDRTYKQTLPTPGYDSFTDATLGAGTSAAVANGFDVDSPYNAFLPYDLTQLAIFGEVNYQVNDDLKVTAGSRFY
DYEEERQFISGGLFANGDNQTDATESDGFTSRILGQYRLNDNVNINAQISEGFRLGGVNDPLNRSLCSDQDEAIFGSFQD
YEDEQLTNYELGFKSSGRGWSANVSAFYNDIEDLQVTLDAGSCSSRVSFNVPDAHTQGLEFELTRQFTDQLFFSLSGSII
EAEFDSTVVDGSGAVLGGVEDGNRLASVPEESFSISFTYDLASPLFSSNSTYFQGSYQYVGDRITQPSDQVAGAGTFVSG
LAFGGATGQETTELDLVLDAYGTMNLSFGLAYDDYEILLYANNVFDENALLSLDRERGGRARLGFTTNQPRTIGATFRYF
FE

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA