Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109896401

GI number:

Start: 80654

End: 82669

Strand: Direct

Name: Not Available

Synonym: Patl_0070

Alternate gene names: NA

Gene position: NA

Preceding gene: 109896399

Following gene: 109896408

Centisome position: NA

GC content: NA

Gene sequence:

>2016_bases
ATGAAACTCAACCCCGGCCAAAACGACGCGGTAAATTACATCTCTGGCCCTTGCTTAGTGCTGGCGGGCGCTGGTAGTGG
TAAAACCCGTGTTATTACCAATAAGATTGCGTATCTAGTGCGCGAATGCGATATTCCTGCGCGCTATATCGCCGCCGTTA
CCTTTACCAATAAAGCTTCGCGAGAAATGAAAGAGCGTGTGGCGCAAACGCTTGGGCGAAAAGAAGCTCGTGGGCTAAAG
GTCTCTACTTTCCATACTTTGGGCCTGAGAATTATCAAAACTGAAGTAAAAACCCTAGGCTTAAAAGCAGGGTTTTCCTT
ATTTGATGATAAAGACAGTATGGCGCTGCTCAAGGATTTGACCGATGTGGAGCTGGGCGGCGACAAAGAACAACTGCAAC
TATTGCAAAGCTGCATTTCTAATTGGAAGAATGATTTGTTGCTGCCAGAGCAATTACTTAAACGCACGTCCTCAGCGGGG
GAAGCGGAGTTTGCTGAGTTTTACCAGCGTTATCAAAATCACTTACGGGCGTACAATGCGTTAGATTTTGATGATTTGAT
CCTGTTACCGACTTTATTGCTCAAGCACAATGAAACAGTGCGCCAGAAATGGCAAAGCCGAATTCGTTATTTGTTGGTGG
ATGAATATCAGGATACCAACACCAGTCAATACGAGTTAGTGCGCTTATTGGTGGGTCAGCGTGCGCGCTTCACCGTGGTT
GGGGACGATGATCAGTCGATTTATTCGTGGCGTGGGGCTAGGCCACAGAACTTGGTGTTATTGAGCAAAGATTTCCCTGA
CTTGAGGGTGATTAAGCTTGAGCAAAACTATCGTTCATCAGGGCGCATTTTGCATTGCGCCAATATTCTGATCCAAAACA
ACCCGCATGTGTTTGAGAAGAAGTTATTCTCTGAATTAGGCTACGGTAGTGAGCTTCGCATCATCACTGCTAAAAATGAA
GAACATGAGGCCGAGAGGGTGGTCGCTGAACTTATTGCTCACAAGTTTATGCAAGGTACAAGTTTCAAAGATTACGCCAT
TTTATATCGAGGAAACTTCCAATCTCGCTTGTTTGAAAAAGTCCTTATGGCCAACCGTATCCCTTATAAAATAAATGGTG
GCACTTCGTTTTTTGGGCGGACTGAAGTGAAAGACATCATGGCGTACTTACGCCTATTGGTGAATCAAGATGATGATAAT
GCCCTGTTGCGCATCATCAACACACCCACCCGCGGTATAGGACGCGTCACGTTAGAAAAGCTTGGAAATTACGCGAACGA
AAATCACATTAGTATGTTTGAAGCGGCGTGTTCGCCGATGTTGAGCACCGTGATATCCGGTAAGTCTCTTGAGTCGGTAG
AGCGATTCGCCCGCTGGATAGTGGAACTGTCTGATGAAATAAAACGAAGCGACAGTATTGCAGCCATCCGCCAAATGATT
AAAGACATGGGTTACGAAGAGTGGCTCTATGAAAGCAGTACCAGCCCTAAAGCGGCCGAAATGGGCATGGGCAACATCAG
TACGTTATTTGGCTGGGTTAGCGATATGCTTGAAGGTGGAGAGCTAGACCCACCTATGAGCCTACAAGAGGTGGTCAACA
GACTCATTCTGCGCGACATGATGGAGCGCGGAGAAGACACAGAAGAAACGGATCAGGTGCAACTTATGACGTTGCACTCA
TCTAAAGGGTTAGAGTTTCCTTACGTATTTATGGTGGGTATGGAAGAGGGGTTGTTGCCCCATCAAAGTAGTATCGATGA
GGACAATATCGAGGAAGAGCGTCGTTTAGCCTACGTGGGGATCACGCGGGCTCAGAAGGAGTTGTTTTTCACCTTAGCCA
AAGAGCGTCGCCAATATGGTGAAGTGATACAACCTGAGCCTAGTCGCTTTTTACACGAACTACCCGCTGATGATATTCAC
TGGGAAGTGAAGAAACCTAAAGTGAGCGCCGAGGCCCGCCAGCAAAAGGGCCAAACAGGCATTGCTCACCTGCGGGATAT
GATGAACAAAAAGTAA

Upstream 100 bases:

>100_bases
TCAACTATCAGTTTTCATACAGACAGATTTTGTTGCGGATTATTCGCCTTCATAGGGGGTTTAATATTACAATTCGCTGC
CCAATACAAAAGTGAATTGC

Downstream 100 bases:

>100_bases
GCTCTAAATCGGCAGTGTTACTTGAGATGGGGCTTCTAAATAGGGTCCTTGACCCAATTGACAGCCAACTGAGCGCAGTA
GGTCTACTTGCTCTTTGTCA

Product: ATP-dependent DNA helicase Rep

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>671_residues
MKLNPGQNDAVNYISGPCLVLAGAGSGKTRVITNKIAYLVRECDIPARYIAAVTFTNKASREMKERVAQTLGRKEARGLK
VSTFHTLGLRIIKTEVKTLGLKAGFSLFDDKDSMALLKDLTDVELGGDKEQLQLLQSCISNWKNDLLLPEQLLKRTSSAG
EAEFAEFYQRYQNHLRAYNALDFDDLILLPTLLLKHNETVRQKWQSRIRYLLVDEYQDTNTSQYELVRLLVGQRARFTVV
GDDDQSIYSWRGARPQNLVLLSKDFPDLRVIKLEQNYRSSGRILHCANILIQNNPHVFEKKLFSELGYGSELRIITAKNE
EHEAERVVAELIAHKFMQGTSFKDYAILYRGNFQSRLFEKVLMANRIPYKINGGTSFFGRTEVKDIMAYLRLLVNQDDDN
ALLRIINTPTRGIGRVTLEKLGNYANENHISMFEAACSPMLSTVISGKSLESVERFARWIVELSDEIKRSDSIAAIRQMI
KDMGYEEWLYESSTSPKAAEMGMGNISTLFGWVSDMLEGGELDPPMSLQEVVNRLILRDMMERGEDTEETDQVQLMTLHS
SKGLEFPYVFMVGMEEGLLPHQSSIDEDNIEEERRLAYVGITRAQKELFFTLAKERRQYGEVIQPEPSRFLHELPADDIH
WEVKKPKVSAEARQQKGQTGIAHLRDMMNKK

Sequences:
NA

Specific function: NA

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA