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The map label for this gene is fdoG [H]

Identifier: 108813866

GI number: 108813866

Start: 4253701

End: 4254288

Strand: Reverse

Name: fdoG [H]

Synonym: YPN_3706

Alternate gene names: 108813866

Gene position: 4254288-4253701 (Counterclockwise)

Preceding gene: 108813872

Following gene: 108813865

Centisome position: 93.82

GC content: 52.38

Gene sequence:

>588_bases
ATGCAGGTCAGCAGAAGGCAGTTCTTTAAGATCTGCGCTGGCGGTATGGCAGGAACAACGGTCGCGGCACTCGGCTTCGC
GCCGTCAGTGGCGCTGGCGGAAACGCGCAATTATAAATTGCTGCGCGCTCGCGAGACACGTAACACCTGCACATATTGCT
CTGTCGGTTGTGGGCTTTTGATGTATAGCCTTGGCGACGGCGCGAAAAATGCTAAAGAAAGTATTTTTCACATTGAAGGG
GACCCGGATCATCCGGTGAACCGTGGCGCACTGTGTCCGAAAGGGGCAGGGTTAGTCGACTTTATCCATAGCGAAAGCCG
CTTGAAATACCCAGAATACCGGGCGCCAGGCTCAGACAAGTGGCAGAGAATCACTTGGGATGATGCGTTTACCCGTATTG
CCAAATTAATGAAAGAAGACCGGGACGCTAACTTCATTAAGACCAACGACGCCGGTGTTACCGTCAACCGTTGGTTAAGC
ACCGGTATGCTGTGTGCTTCGGCATCAAGCAATGAAACGGGTTATTTGACCCAAAAATTTAGTCGCGCTCTCGGCATGCT
TGCCGTAGACAACCAAGCACGTGTCTGA

Upstream 100 bases:

>100_bases
CACACAGAAAAAGCGTGATATCGCATGAGCGATTTTAGCGCCTCCCATTTTATTGAGGGAAGCGTGAACTGGAAATAATG
TGACAATGAAGGAGATACCC

Downstream 100 bases:

>100_bases
CACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTTGACATTAAGAACGC
GGATTTAATTATCGTCATGG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MQVSRRQFFKICAGGMAGTTVAALGFAPSVALAETRNYKLLRARETRNTCTYCSVGCGLLMYSLGDGAKNAKESIFHIEG
DPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDKWQRITWDDAFTRIAKLMKEDRDANFIKTNDAGVTVNRWLS
TGMLCASASSNETGYLTQKFSRALGMLAVDNQARV

Sequences:

>Translated_195_residues
MQVSRRQFFKICAGGMAGTTVAALGFAPSVALAETRNYKLLRARETRNTCTYCSVGCGLLMYSLGDGAKNAKESIFHIEG
DPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDKWQRITWDDAFTRIAKLMKEDRDANFIKTNDAGVTVNRWLS
TGMLCASASSNETGYLTQKFSRALGMLAVDNQARV
>Mature_195_residues
MQVSRRQFFKICAGGMAGTTVAALGFAPSVALAETRNYKLLRARETRNTCTYCSVGCGLLMYSLGDGAKNAKESIFHIEG
DPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDKWQRITWDDAFTRIAKLMKEDRDANFIKTNDAGVTVNRWLS
TGMLCASASSNETGYLTQKFSRALGMLAVDNQARV

Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI3868720, Length=195, Percent_Identity=92.3076923076923, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI3868719, Length=195, Percent_Identity=84.1025641025641, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006443
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 21427; Mature: 21427

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSRRQFFKICAGGMAGTTVAALGFAPSVALAETRNYKLLRARETRNTCTYCSVGCGLL
CCCHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHH
MYSLGDGAKNAKESIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDK
HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
WQRITWDDAFTRIAKLMKEDRDANFIKTNDAGVTVNRWLSTGMLCASASSNETGYLTQKF
CEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHCCEEEECCCCCCCCHHHHHH
SRALGMLAVDNQARV
HHHHCEEEECCCCCC
>Mature Secondary Structure
MQVSRRQFFKICAGGMAGTTVAALGFAPSVALAETRNYKLLRARETRNTCTYCSVGCGLL
CCCHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHH
MYSLGDGAKNAKESIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDK
HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
WQRITWDDAFTRIAKLMKEDRDANFIKTNDAGVTVNRWLSTGMLCASASSNETGYLTQKF
CEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHCCEEEECCCCCCCCHHHHHH
SRALGMLAVDNQARV
HHHHCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 8522521 [H]