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The map label for this gene is yqiG [H]

Identifier: 108813849

GI number: 108813849

Start: 4234330

End: 4234965

Strand: Reverse

Name: yqiG [H]

Synonym: YPN_3689

Alternate gene names: 108813849

Gene position: 4234965-4234330 (Counterclockwise)

Preceding gene: 108813850

Following gene: 108813848

Centisome position: 93.39

GC content: 49.06

Gene sequence:

>636_bases
GTGTTCCGTGGTGGTTATCAACATAGCTCGCCTTATGGTGAATTTGGTCTTGATGGTAGCCATAAAAATAATGAGTACAA
CTCAATCAATACCAACTGGTATGGCTCAATTACGGCAACCGCTTATGGGGTTGCTGCCCACCAGAATAAAGCGGGCAATG
AACCAAGAATAATGGTTGATACCGGGGATGTCGCAGGGGTGTCGCTGAATAATAACTCGGCAGTGACGAACCGTTTTGGT
GTGGCGGTGGTCAGTGGCGCAACCAGCTACCAACAGTCTGATATTCGGGTGGATGTGCAGAATCTGCCGGATGATATTGA
GGTCTACAACACCGTTATCCAAAAAACGCTGACCGAAGGGGCAATTGGTTACCGTGAGATAAGGGCGGTAAAAGGTCGGC
AAATGATGGCGATTATTCGCCTGAAAGATGGCAGTTCCCCCCCCTTGGGGGCATCCGTTATCACGGACAAAACGGGCGCT
GAAGTTGGAATTGTGGGAGACGATGGCCTGACGTATTTGGCGGGATTACAAGACACTGAGAGGCTGACTGTTCAATGGGG
GAAAAAACAGTGCACGCTCATATTGCCAAAAGATAAAGGAATGAACTCAGGAAAGGTACTACTGCCCTGCCAGTAA

Upstream 100 bases:

>100_bases
GGCTACACGCAAAATATCTCCTTTCAACAACCAGAATCCGAAAAATATTTGGCGTATCAGCGCGGGTGGCGGTAACCCAG
AACTGTAAAAAGGTAATGGT

Downstream 100 bases:

>100_bases
GTGTTTTTGGGGAAAAATATTCATTAAAACGGTTGTTGATCGAAACTGAGTTATTCACAGCCAAATGCGGCCTTTTACAG
TGGAATAGCGAAATGAAAGA

Product: outer membrane fimbrial usher porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFG
VAVVSGATSYQQSDIRVDVQNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGA
EVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Sequences:

>Translated_211_residues
MFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFG
VAVVSGATSYQQSDIRVDVQNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGA
EVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
>Mature_211_residues
MFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFG
VAVVSGATSYQQSDIRVDVQNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGA
EVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=208, Percent_Identity=40.3846153846154, Blast_Score=158, Evalue=2e-40,
Organism=Escherichia coli, GI1789533, Length=193, Percent_Identity=29.0155440414508, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1790772, Length=196, Percent_Identity=28.0612244897959, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 22674; Mature: 22674

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEE
TGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQNLPDDIEVYNTVIQKTLTEG
CCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
AIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTE
CCCHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCC
RLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
EEEEEECCCEEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure
MFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEE
TGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQNLPDDIEVYNTVIQKTLTEG
CCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC
AIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTE
CCCHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCC
RLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
EEEEEECCCEEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]