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The map label for this gene is 108813738

Identifier: 108813738

GI number: 108813738

Start: 4087356

End: 4088444

Strand: Reverse

Name: 108813738

Synonym: YPN_3578

Alternate gene names: NA

Gene position: 4088444-4087356 (Counterclockwise)

Preceding gene: 108813739

Following gene: 108813737

Centisome position: 90.16

GC content: 50.32

Gene sequence:

>1089_bases
ATGGCCGGTACAGACAGGTCAACATGCACTGATGTAAGTGTGGTTGAGGATGTAAGTGGGGTTGAGAATGTAAATGGGGT
TGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAATTGGTCGAATTGCTCAACCAATTGG
CGGTAGCGTGGCAAGGTGCGGCCCCTGTGGCGACCCCAGCCAATGAAGCCATCCGTTTTAAATCGACCGCCAGTTTAGCA
TTCCCGACCAGAGATGTGATCGCACTGGACACCTCCGCCCGAGGTCAATTTGAGTTAGAGGTCTCTTTCCTTGGATTGCA
TGGCAGCCAATCGCCGCTACCAGGATATTACCTCGATTCGTTAGCGTGGGAGGATGCGCAGAATGAGAACCGGCTAACGG
ATTTCATGAACGTATTCAACCACCGCCTGTTAACGCTACTGCATCAGATTTGGCGTAAATACCGTTACTACATCTGCTTT
GACAATGGCGGTGATGATGCATTTTCACAACGCATGTTCTCGCTGGTGGGGTTAGGTAGCGAGGTCGTCCGCAATAAATT
GCAGATCAATCACAGCAAAATGCTGGCTTATGCAGGGCTGCTGGCCAGCCCCGGCAGAGCACCTGAAGTGATTTGCAGCC
TTGTCTCACATTGCTTCAATTTGCCAGATATCACCTTACACAGTTGGCAGCTACGCAAAGTGGATATTGCCCCCTCACAG
CAGAATCGCTTGGGGACGAGGGTGAAAGTCCGTGGCAAGAAATATGATGAAAAATCAGTGCTTGGCGTTAATTTCTCCAT
CGGTTCACGGGTTGCGGATCGTAGCGGGAAATTCTTGTTGTGCATCAATAAGCTGACGCGAGAACAGTTCTTATCCTTTT
TACCCAACGGGGCTAATTACGCCTCGTTAGTGATGTTTGTCGCCTTCATTATGCGCGATCAATTCGCGTGGGATTTACGC
CTTGGGTTGGCCGAGCAACAGGTGGGCGGGATGGTGTTGGGAACCGAGCAAAATAGCCTATTGGGCTGGACCAGTATCCT
CGGCGATCCCGAACAGAAACCCAGCGTAACGATTGGTGTAATGGAATAA

Upstream 100 bases:

>100_bases
TCTTCAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTCATCAATCTT
GATAATCAGGAATGTTACGA

Downstream 100 bases:

>100_bases
CGATCAGTGTAATGGGATAACGGCCGACGCGATGGAATAACGGTCGGCATGATGAAATAACGACCCGCGTTGTGAAATAG
CGATCAGCGTTATGAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Quinoprotein Dehydrogenase; T6ss R; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpG; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLA
FPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICF
DNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQ
QNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLR
LGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Sequences:

>Translated_362_residues
MAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLA
FPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICF
DNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQ
QNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLR
LGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME
>Mature_361_residues
AGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLAF
PTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFD
NGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQ
NRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLRL
GLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40178; Mature: 40047

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGA
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
APVATPANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDS
CCCCCCCCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHH
LAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVGLGS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCH
EVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQ
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCC
QNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANY
CCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCH
ASLVMFVAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGV
HHHHHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEEEEE
ME
EC
>Mature Secondary Structure 
AGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
APVATPANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDS
CCCCCCCCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHH
LAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVGLGS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCH
EVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQ
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCC
QNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANY
CCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCH
ASLVMFVAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGV
HHHHHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEEEEE
ME
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA