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The map label for this gene is ssaK [H]

Identifier: 108813564

GI number: 108813564

Start: 3879460

End: 3880107

Strand: Reverse

Name: ssaK [H]

Synonym: YPN_3404

Alternate gene names: 108813564

Gene position: 3880107-3879460 (Counterclockwise)

Preceding gene: 108813565

Following gene: 108813563

Centisome position: 85.57

GC content: 55.09

Gene sequence:

>648_bases
GTGAACCCCTTTCACCTCGAGATTGAAAAGTACGGTTATCCATTGCCGCCTGGCGTAGTTATTCCGGCGGCTTATCTGGC
AGAGGCCATGCACAGCCAGGATCTCTTGGCACAGGCCAACGCGCAAGCGGCAGAGATACTGCAAGCGGCGGAGCAGGCGC
GTGTGTTGTTGCTCGATCAAGCGGCGGAGCAGGCTGATGCACTGATCAGTCAGGCGCGTGAGCAGATGGAAACCGCACTG
CTAGCACAGCATGTTCGCTGGCTGGTGGGCGCGGAGCAATTGGAGTCGTTACTGATAACCCAAGTTCGCCACCGTATTTT
AGCCGCCATCACGACAGTGGTAACGACCTGGAGCGGTGAACAACCGATGAGCCAGATTTTGATCCAGCGGCTGGGGGATC
AAGCAGAGAAAATGGCACAGCAAGGCGAATTAACATTACGGGTTCATCCACAGCACCTGCCAGCGGTGACCACCGCATTG
GGAGAGCGTCTGCGTTGTGTAGGGGATACGGAGATGGCCGCAGATCAGGCACAACTCAGCTCTCCAATGCTGCAACTTAC
GCTTTCTCTCCACCACCATTTATCTCAACTGGTTCTGTGGCTACAGCAGTCGCCAGATCTTTTCGACGAAGAGAATGTTT
ATGAGTAA

Upstream 100 bases:

>100_bases
CGGTCTCCATCTTGCTCCCCCCTAACCCCCGTGCGCTATGCCTGTCACGTTCTATGCAGGCGCAAACAGAAGCCTGGTTA
AGCCGGTTGGAGCGTTTATT

Downstream 100 bases:

>100_bases
GTCAGCACTGGTGCGGGGTTTGACGATGATCACCGCGCGGCAGGATATTTTTTTAGCGGTCATGTTGCTGGTGGCGGTCT
TTATGATGATCCTGCCACTG

Product: type III secretion system apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNPFHLEIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALISQAREQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITTVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE

Sequences:

>Translated_215_residues
MNPFHLEIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALISQAREQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITTVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
>Mature_215_residues
MNPFHLEIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALISQAREQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITTVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23859; Mature: 23859

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFHLEIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQ
CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AAEQADALISQAREQMETALLAQHVRWLVGAEQLESLLITQVRHRILAAITTVVTTWSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTALGERLRCVGDTEMAADQAQLS
CHHHHHHHHHHCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNPFHLEIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQ
CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AAEQADALISQAREQMETALLAQHVRWLVGAEQLESLLITQVRHRILAAITTVVTTWSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTALGERLRCVGDTEMAADQAQLS
CHHHHHHHHHHCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]