| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108813490
Identifier: 108813490
GI number: 108813490
Start: 3797311
End: 3799866
Strand: Reverse
Name: 108813490
Synonym: YPN_3330
Alternate gene names: NA
Gene position: 3799866-3797311 (Counterclockwise)
Preceding gene: 108813491
Following gene: 108813488
Centisome position: 83.8
GC content: 34.15
Gene sequence:
>2556_bases ATGAGACAAGTAACGAAATCAAAGAAAATTAAAATCTTGCCATACCCAGAATGGTTAGTTAAGGCCGGGATGTCAAAAGG TATAGATCATGATAGGCAACATTTAGGCATTATTCTTGCTGCAGGTGAAATGATTAAAGTCAGACAAGTCAATGCTGAAT ATAAGGAAAAACTTAAATTATATTTACTCAATGATAATAAAAATACTCAACGATCGATAAGTTTTAATACTGATTGGATA GAGCTGAGTGTCGATGCTATTTCAGTACCCTTTATTAATACCCCATATAGTGATGGGATTATTCCTGAGATTGTTTTTGA GTATCCGGATACTTCTAAATTACTGCCAGTTTATGAAAAAGGAGAGGATGAGAGCATCTTCTTTGAAAGTTGGGATAAAC AGAATGCCGAGTTTGGCGTGGTAGAATCAGAATATGTAATAATTCTGATCCCGGAAGTTAGTAAGGACAGGCTAAAATCT TTCAGTACGAGTGGCGGTATTGATACAGTTTTGGGGTTTTATCAAGATATTTTTTCTTTCAATAATTCTCTGGCTGGCTT GTCTTTTGAACCGCAAAGATATTCTGACGGAAACACACGAAATCGTTACTTTGCTAAAGCAGATAAAGGGGGCGGTGGGG CAGCATATTATTCTAATAATTGGATTGCCTCATCCTCTGGTTCTATAAATACATTTTGGCTTTCTCCCAATGCTACTAAC TGGGGCTGCCTACATGAAATTGCGCATGGTTATCAGGGCGGGTTTATTGATGATAAATATTTTTCCACAAGAGAAGTATG GAATAATATTTATGCTGCCTGCTACCAAGATGTTATGTTAGGTGCTGAAAAGTTTAATAAAGGGTGGCTATATAATTTCG GTAAGCAAAAAGAGGTTGAAAAAAGTATTTTAAATAACATTAATAATGGTAAAGAAGTAAATGCTTGGGGGGAACGTAGC AAATTATATTTTATCATGCTGATGCTGGAAAAAGCGGGGGTAAATTGTTTTACTCATTTCAACCAGATATATCGTGAGCG TAAAAATACTGATCAAAGCGTAGGCTCGGTGTTAGATATGCTCTCAAATAGTTTCGCAACTGTTGAAAATCGAGTTGATG TTACACTATTTTTACAAATGGTTGGGGGACATATATCTAAAAATCAATATCAACGTAACTTATTTAGCCATGCAAAGGCG GTATATCCATTAAATCAACTCTTGCAAGGTGATGAACTCACTGCTGTTAAGAAAACGCTAGATTTGAATAGTGAACTCAG TCTTGTTGATGTGGATAGTATTGAATTTACAGATATAAAAAGTAATTTGACATTGCAATTTTCTATAGATGATTTCGCTC AGATATATGGCGAAGAATTGCTTATACTGAATGGTGACAACTATGTGTATAATCAATCTATTATGGATAAAAAACAAACT TTATATAATCTCCCCGTTGGTGCTTATACATTGCGAATTCCAACAGGAAGAAATAAAAAATATGCACCACAAATTAATTA TCTGATAGTGAAAAATGAAGATAGCCAAACACAAGTTGATTTTGTCCACAGAATAGGATCTCCAATTGTTTCACAAAAAA TTTCTTTGCAGGGACTAAATGATTATACATTTGCAACTATATTTTTTGATCAAGAAAATGATACTGTCAGCGTTGATATT ACTAAGACTAAACCACATTATCATTTCCCTGGCATGTATGCGAGAATAAGAATAAAAGACAAAGATAATAATGAGCTACT CAATGAAGTTATTACAGGAACTAATCAATCGCTGAGTAAAAATGATTTTCCACTATCTTCTTGTTATGTTATTGATATCT TTCACAAAGAGCCTGGTAGGGTAAAGCTAACTCCGGCATATAAAGGTGTGATTGATAATAAATCCAGTTACAATGAATTT ATTATCACGCCTTATGGTTTGCAAAACATCAAATTGAATAATGATCCAAAGGTTTTTTTATTGGAAAATATAAAATCGGC AGCAGAAATGCTGCGTAGTCACCCTATAATGTGGCATGCGAATTTTTCAGAAGCTAAAGATAATATATATTTGGCAATCG ATATCTTTCCTAGCCCACAAAAGGAAGGTTTACTAGAGCAATATGCTGATTGTATTTCTTCCTACTATGAAAAGCCAAAT GAAGACTTGGGTAATGCATTTAGTTTTATCTTTAAAGGAATTAATGACCGAGAATTTTTGACAACTAAGCTTAATTTAGT GACAAAAAAACTTGAAGTTAAAATTGTAAGTGGTACTCCACATAGTGGATTCAAAAGGACTTACGCTGTACTACGTTATT TTAATGCTGATGGAAATGAACTCCTTAATCTGGATATTATTGGTAGTAAAAAACAGGCTGGACAAGAATGGGTATTCCCT ATATCAGGTTATGGTGGAGAAAAACTCTATCTTCAACATGTGGAACCTAAAAATAGATTAGTGATTACCAATATTATGCA AGGAATCAGATTATCATCGCGCACAAGCATACAAACCTATGAAATAGAATCTTTGGGGTTGAGTCGTTGCACCTGA
Upstream 100 bases:
>100_bases TAGATATATTTCAAAATAATTTTTTATATGTAAATATCACTAATGAATTACATTGGGGCTTTAATCTATAAGTTATGTAA TTTTAGTGAGGGTTATATTT
Downstream 100 bases:
>100_bases CCCTAAGCGACATTTCTCATCGCATAAGCCACAACCGTCGATATGGCAGATTTACGTTGGCCTTAATGGGGAGCTGCGAT GAGTTTCATTGTGTTTAAAT
Product: enhancing factor
Products: NA
Alternate protein names: Enhancin Family Protein; Surface Associated Protein With Similarity Proteases; Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAISVPFINTPYSDGIIPEIVFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTLFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAEMLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTTKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Sequences:
>Translated_851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAISVPFINTPYSDGIIPEIVFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTLFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAEMLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTTKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT >Mature_851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAISVPFINTPYSDGIIPEIVFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTLFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAEMLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTTKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96935; Mature: 96935
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKL CCCCCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHCCCEEE YLLNDNKNTQRSISFNTDWIELSVDAISVPFINTPYSDGIIPEIVFEYPDTSKLLPVYEK EEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCCCEEEECCCCCCCCCCEEC GEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQDIFSF CCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHH NNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN CCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEECCCCCC WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVE CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH KSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDM HHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LSNSFATVENRVDVTLFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTAVKKTL HCCCHHHHCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH DLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT CCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHHHHHHH LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLN HHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEEECCCC DYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSK CEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCCCCCCC NDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNNDPKVFL CCCCCCEEEEEEEEECCCCCEEECHHHCCEECCCCCCCCEEEECCCCEEEEECCCCCEEE LENIKSAAEMLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC EDLGNAFSFIFKGINDREFLTTKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNE HHHHHHHHHHHCCCCCCCEEEHHHHHEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCE LLNLDIIGSKKQAGQEWVFPISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTY EEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCEEEE EIESLGLSRCT EECCCCCCCCC >Mature Secondary Structure MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKL CCCCCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHCCCEEE YLLNDNKNTQRSISFNTDWIELSVDAISVPFINTPYSDGIIPEIVFEYPDTSKLLPVYEK EEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCCCEEEECCCCCCCCCCEEC GEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQDIFSF CCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHH NNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN CCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEECCCCCC WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVE CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH KSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDM HHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LSNSFATVENRVDVTLFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTAVKKTL HCCCHHHHCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH DLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT CCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHHHHHHH LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLN HHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEEECCCC DYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSK CEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCCCCCCC NDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNNDPKVFL CCCCCCEEEEEEEEECCCCCEEECHHHCCEECCCCCCCCEEEECCCCEEEEECCCCCEEE LENIKSAAEMLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC EDLGNAFSFIFKGINDREFLTTKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNE HHHHHHHHHHHCCCCCCCEEEHHHHHEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCE LLNLDIIGSKKQAGQEWVFPISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTY EEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCEEEE EIESLGLSRCT EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA