Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108813470

Identifier: 108813470

GI number: 108813470

Start: 3775111

End: 3775302

Strand: Reverse

Name: 108813470

Synonym: YPN_3310

Alternate gene names: NA

Gene position: 3775302-3775111 (Counterclockwise)

Preceding gene: 108813475

Following gene: 108813469

Centisome position: 83.26

GC content: 29.17

Gene sequence:

>192_bases
GTGAGTCATTATTCTTTAGGTATTCTTAATATTATTATTCCGCTAACTTATTTCTCTGCGGTTAACTTGATGATATTAAG
AATAGCTATTTCTTACTTTTTGTATGGAATAATTATACTCAATGATAAGTCGCAGAAATTTGATGTGATCGATTGTTTTG
TTTTATTTGAACCGCCTCAAATGCATTACTGA

Upstream 100 bases:

>100_bases
TCTCCATTGTTCAAGTGAAAATCTTATACCCTCCGCCCCTGCCGTTACAGGGTGTTAGCTAACTGCCTGGCTGTAACGCC
AAGGGTTTTGAGTATATAAA

Downstream 100 bases:

>100_bases
CAAAAACGTGATCCCAAACAGGATATGCTGGGAAAGGCGTTTTTTTACAGCGTGAAATGCTAGAACCAGACCGAGAATTC
GGCGGATGAGTGACAGATTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSHYSLGILNIIIPLTYFSAVNLMILRIAISYFLYGIIILNDKSQKFDVIDCFVLFEPPQMHY

Sequences:

>Translated_63_residues
MSHYSLGILNIIIPLTYFSAVNLMILRIAISYFLYGIIILNDKSQKFDVIDCFVLFEPPQMHY
>Mature_62_residues
SHYSLGILNIIIPLTYFSAVNLMILRIAISYFLYGIIILNDKSQKFDVIDCFVLFEPPQMHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7358; Mature: 7227

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYSLGILNIIIPLTYFSAVNLMILRIAISYFLYGIIILNDKSQKFDVIDCFVLFEPPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEECCCC
MHY
CCC
>Mature Secondary Structure 
SHYSLGILNIIIPLTYFSAVNLMILRIAISYFLYGIIILNDKSQKFDVIDCFVLFEPPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEECCCC
MHY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA