Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108813339

Identifier: 108813339

GI number: 108813339

Start: 3584671

End: 3585000

Strand: Reverse

Name: 108813339

Synonym: YPN_3179

Alternate gene names: NA

Gene position: 3585000-3584671 (Counterclockwise)

Preceding gene: 108813340

Following gene: 108813338

Centisome position: 79.06

GC content: 40.61

Gene sequence:

>330_bases
ATGATGCTTAATCCTCTGCTTATGAAGCAGGCTGAAGTTGAACCCAACAACTTACCTGATGGTAAGTTAGGACAACCCTA
TTATGCTAAACTTAGAATAACGGGGGGAGGCGGTGCTATTGCTTCTTTTAAGGGAGAATCGATGCCAGTTGGATCAGGGT
TGGTATTAACATCGGATAATCCAGAGCGACCACCGGGTAGAGATGAACTGGTTATAAAAGGCATTCCTGTGATATCTGGT
GATATTACGTTTAGAGTCAGCGGTGCCTTGTTTAGTAGTGCAGATAAAGGTTATTTTGGTAAAGAATATAAATTAAAAAT
AGCCGAATAA

Upstream 100 bases:

>100_bases
TTTGGGGGCGGCATGTTAAAAAATGTCATAAATTATGATGAATAAATTTTTTAAAATAATATCGATAAATTTATTGGCAA
TTTCTCTTGGTGGTTGTGGG

Downstream 100 bases:

>100_bases
TATTAATTTCGGTAATGACTCCAATTGGTTGAATTTGATGTACAATGCGATTTTTTGAGGTTTGCTCATGGCTTGCATTA
ACGTTCATTGTCCCCGTTGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISG
DITFRVSGALFSSADKGYFGKEYKLKIAE

Sequences:

>Translated_109_residues
MMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISG
DITFRVSGALFSSADKGYFGKEYKLKIAE
>Mature_109_residues
MMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISG
DITFRVSGALFSSADKGYFGKEYKLKIAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11614; Mature: 11614

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTSDN
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCC
PERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGYFGKEYKLKIAE
CCCCCCCCCEEEECCCEECCCEEEEECCEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTSDN
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCC
PERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGYFGKEYKLKIAE
CCCCCCCCCEEEECCCEECCCEEEEECCEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA