Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108813337

Identifier: 108813337

GI number: 108813337

Start: 3583795

End: 3584166

Strand: Reverse

Name: 108813337

Synonym: YPN_3177

Alternate gene names: NA

Gene position: 3584166-3583795 (Counterclockwise)

Preceding gene: 108813338

Following gene: 108813336

Centisome position: 79.04

GC content: 30.11

Gene sequence:

>372_bases
ATGGTGTTTGGAATCAAAAATAAATTTATGTTAAAACTAATTATTTTTATTATCTCAGTAATTATTATGATTGGTAGTTA
CAGTTTTGTCTCGGCCTTGTACATAAGTATGTTCGATATTACTTCTCACAGAAGCGTTGGGATGATATTTATATCTTTTT
ATTTTTTATTGATTGCCTCACCTGTTTTACTTATAACTTTATTCACAAGATTCAGGGTTAGTTTTGCGATTTTACTTTGT
GGAGTATGTTATTTATTCTTTGAATGGTACTCGTTGCACCCTCTCAGAGTTATATTGATGGGGGCAAGTGTAGTAAATGG
ATATATTTTCATTTTGACGACTAGAAAAATATGGAGCGTGTATTCAATATAG

Upstream 100 bases:

>100_bases
TGTCGGCAACAAGGCCCATCAGTAGAAACTACGGAGTCATCAATAGTAGTCAATGCGATGCTTCTGGAGGAAAGTATATC
GAAAGAGGAGTTAGATAAAT

Downstream 100 bases:

>100_bases
TGTTCATCAGATAAACTACTCGTTTTTATCTGATGGATTCTTATGGCTAATGTTGATGTAAAATATCTGATTTTTCAGCA
CAGGCTCGGTGAAAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MVFGIKNKFMLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLC
GVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI

Sequences:

>Translated_123_residues
MVFGIKNKFMLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLC
GVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI
>Mature_123_residues
MVFGIKNKFMLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIASPVLLITLFTRFRVSFAILLC
GVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSVYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14224; Mature: 14224

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFGIKNKFMLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIAS
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
PVLLITLFTRFRVSFAILLCGVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEHHHHHHH
YSI
HCC
>Mature Secondary Structure
MVFGIKNKFMLKLIIFIISVIIMIGSYSFVSALYISMFDITSHRSVGMIFISFYFLLIAS
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
PVLLITLFTRFRVSFAILLCGVCYLFFEWYSLHPLRVILMGASVVNGYIFILTTRKIWSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEHHHHHHH
YSI
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA