Click here to switch to the map view.

The map label for this gene is 108813243

Identifier: 108813243

GI number: 108813243

Start: 3466827

End: 3467114

Strand: Reverse

Name: 108813243

Synonym: YPN_3083

Alternate gene names: NA

Gene position: 3467114-3466827 (Counterclockwise)

Preceding gene: 108813246

Following gene: 108813242

Centisome position: 76.46

GC content: 39.58

Gene sequence:

>288_bases
GTGATCACTTACAAAAGTGAGGAAACGATGGTCAAGGTTGACTGGTCGAGGAAAGCAGTTAAGCAGTTACTTTCAATAGA
TGCCAGATATCGTAAACCTATCAGTGAAAAAGTGAATAAACTGACAAATTTCCCTGCTGTTGATTTGGATATCAAAAAGT
TACAGATGGGTGATAGCCAATTTCGTATGCGTGTAGGGAATTACAGGGTTATCTTTCAGATTGTAGAGGGAACACCTGTG
ATATGTACAATCCAGGAAGTTAAACGTAGAACCACGGCAACCTATTAG

Upstream 100 bases:

>100_bases
TTAATAATCAGTTTTTGATAAGGTAAAGATTAGTTAATAATAAGGTGTTTGTGTTGACCTTGCTTACATATAACTCTACT
CTCTCACCATAACAGCGGAT

Downstream 100 bases:

>100_bases
GTTAGCTCAGTATATTTTCCCTCAAAGGCATGGTGTTATTTTTCTAAACTAAGGTGAATAAGATGGCAAAACTACAATAC
ATTCATGATGAAGCAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Protein; Xin-Antitoxin System Toxin Component RelE Family; Conserved Protein Phage-Related

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MITYKSEETMVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPV
ICTIQEVKRRTTATY

Sequences:

>Translated_95_residues
MITYKSEETMVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPV
ICTIQEVKRRTTATY
>Mature_95_residues
MITYKSEETMVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPV
ICTIQEVKRRTTATY

Specific function: Unknown

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11115; Mature: 11115

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYKSEETMVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQ
CCEECCCCCEEEECCCHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCHH
FRMRVGNYRVIFQIVEGTPVICTIQEVKRRTTATY
HEEEECCEEEEEEEECCCCEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MITYKSEETMVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQ
CCEECCCCCEEEECCCHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCHH
FRMRVGNYRVIFQIVEGTPVICTIQEVKRRTTATY
HEEEECCEEEEEEEECCCCEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA