| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is aas [H]
Identifier: 108813156
GI number: 108813156
Start: 3367035
End: 3368993
Strand: Reverse
Name: aas [H]
Synonym: YPN_2996
Alternate gene names: 108813156
Gene position: 3368993-3367035 (Counterclockwise)
Preceding gene: 108813157
Following gene: 108813155
Centisome position: 74.3
GC content: 51.91
Gene sequence:
>1959_bases ATGCGTTGGCTAAAGCCTTATGTGGATTTTGTTGCGCTGGATCCGACCAACCCGATGGCCATCAAACATCTGGTCAGAAT GGTCGAACAGGGCAGGCCAGTAGTCATTTTCCCTGAAGGGCGCATCACTGTGACCGGCTCCTTGATGAAAATTTATGATG GGGCGGCATTTGTTGCGGCAAAATCAGGTGCGGCGGTGGTCCCTATCCGTTTAGATGGCCCTGAATTTACTCATTTTGGG CGATTGCAGGGCGTGCTAAAAACACGCTGGTTCCCAAAAATCAGTATTCATGTGTTACCGGCCACCACCATTCCTATGCC ACAAGCGCCACGCTCGCGCGAACGGCGAGTTCTGGCCGGTGAGCACCTGCATACCATTATGATGGCGGCCCGCATGGCCA CGGTGCCACGGGAAACGCTGTTTGAAGCGTTGCTATCGGCACAAACCCGTTATGGTCGCTTTAAACCTTGCATTGAAGAT GTCTCATTTAAAGAGGACAGCTACCAGACGCTACTGAAGAAAACGCTCGGTGTGAGCCGTATTTTGCAACGCTTTACCGT GCCGGGTGAGCATGTCGGGATGTTGCTGCCCAATGCCACCATTACTGCGGCTGCTATTTTTGGCGCATCGTTACGTGGAC GAATTCCGGCACTGCTCAACTACACCTCGGGTGCTAAAGGGCTACAGAGCGCTATCATTGCGGCTTCACTTAAAACCATC GTCACCTCGCGCCAGTTTTTGGAAAAAGGCAAACTGACGCACCTGCCGGAACAGGTCAATGAGGTGAACTGGGTCTATCT GGAAGATTTAAAAGACACGGTGACACTGACGGATAAGCTGTGGATCTTATTCCACTTGTGTTTCCCGCGTAGGGCGATGT TGCCGCAGCAGGCTGATGGCAGCGCGTTAATCTTGTTTACCTCTGGATCGGAAGGCAACCCTAAAGGCGTGGTGCATTCT CATGCCAGTTTGTTGGCTAACGTCGAACAAATCCGAACCATTGCTGACTTCACGCCACGTGATCGCTTCATGTCATCATT GCCGCTGTTTCATGCTTTTGGTCTGACGGTGGGATTATTCACACCACTGATGACCGGTAGCCGAGTATTCCTTTACCCTA GTCCGCTGCATTACCGCGTGGTACCTGAACTGGTATATGACCGTAACTGTACCGTGCTCTTTGGGACCTCAACATTCTTG GGGAATTATGCGCGCTTTGCTCATCCATATGATTTCGCCCGCGTGCGTTATGTGGTTGCTGGCGCTGAAAAGTTGGCTGA AAGCACCAAACAGATTTGGCAGGATAAATTTGGTATCCGTATTCTGGAAGGGTATGGCGTAACCGAGTGCGCGCCCGTTG TGGCGATTAACGTACCGATGGCGGCTAAAGTGAACACGGTAGGGCGCATTTTACCGGGGATGGAAGCCCGATTGATTAAC GTACCGGGGATTGCTCAAGGTGGCCGCTTACAATTACGCGGCCCTAATATTATGCGTGGTTACTTACGGGTAGAGAATCC CGGTGTATTGGAGCAGCCATCAGCAGAAAATGCTCAGGGTGAACTTGACGCTAATTGGTATGACACCGGTGATATTGTGA CCCTCGACGAACAAGGGTTCTGCGCGATCCGTGGCCGGGTGAAACGTTTTGCTAAGTTGGCTGGGGAGATGGTATCACTG GAGAGCGTTGAACAATTGGCAATAAGCCTTTCACCGGAAGGGCAACATGCAGCAGCGGCTAAAACTGACAGTGCGAAAGG TGAAGCATTGGTGCTGTTTACCACTGACAGTGAGATAACCCGTGAACGGTTAATCAAAGTGGCACGGGAAAATGGTGTGC CTGAACTGGCGGTGCCGCGCGATATCCGGGTCGTGAAAGCTCTCCCCTTATTAGGCAGCGGTAAACCTGACTTCGTCACG TTGGGCAAAATGGCACAAGATCCGGAGATGAGCGTATGA
Upstream 100 bases:
>100_bases CGCCCAATCACGTCTCTTTCCTCGATGGGGCTTTATTAGCGCTATTTCTACCGATCAAGCCAGTATTTGCTGTCTATACC AGTATTACTGACACCTGTAT
Downstream 100 bases:
>100_bases GTCAGGACGTATTAGCAGATAAGCCTTTGTTATCTCGGAGCATGGTCGCGGTACTCTGTGCTCAGTTTTTCTCCGCTTTC GGGGATAATGCCCTGCTGTT
Product: bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase
Products: NA
Alternate protein names: 2-acylglycerophosphoethanolamine acyltransferase; 2-acyl-GPE acyltransferase; Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Acyl-[acyl-carrier-protein] synthetase; Acyl-ACP synthetase; Long-chain-fatty-acid--[acyl-carrier-protein] ligase [H]
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MRWLKPYVDFVALDPTNPMAIKHLVRMVEQGRPVVIFPEGRITVTGSLMKIYDGAAFVAAKSGAAVVPIRLDGPEFTHFG RLQGVLKTRWFPKISIHVLPATTIPMPQAPRSRERRVLAGEHLHTIMMAARMATVPRETLFEALLSAQTRYGRFKPCIED VSFKEDSYQTLLKKTLGVSRILQRFTVPGEHVGMLLPNATITAAAIFGASLRGRIPALLNYTSGAKGLQSAIIAASLKTI VTSRQFLEKGKLTHLPEQVNEVNWVYLEDLKDTVTLTDKLWILFHLCFPRRAMLPQQADGSALILFTSGSEGNPKGVVHS HASLLANVEQIRTIADFTPRDRFMSSLPLFHAFGLTVGLFTPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFL GNYARFAHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAINVPMAAKVNTVGRILPGMEARLIN VPGIAQGGRLQLRGPNIMRGYLRVENPGVLEQPSAENAQGELDANWYDTGDIVTLDEQGFCAIRGRVKRFAKLAGEMVSL ESVEQLAISLSPEGQHAAAAKTDSAKGEALVLFTTDSEITRERLIKVARENGVPELAVPRDIRVVKALPLLGSGKPDFVT LGKMAQDPEMSV
Sequences:
>Translated_652_residues MRWLKPYVDFVALDPTNPMAIKHLVRMVEQGRPVVIFPEGRITVTGSLMKIYDGAAFVAAKSGAAVVPIRLDGPEFTHFG RLQGVLKTRWFPKISIHVLPATTIPMPQAPRSRERRVLAGEHLHTIMMAARMATVPRETLFEALLSAQTRYGRFKPCIED VSFKEDSYQTLLKKTLGVSRILQRFTVPGEHVGMLLPNATITAAAIFGASLRGRIPALLNYTSGAKGLQSAIIAASLKTI VTSRQFLEKGKLTHLPEQVNEVNWVYLEDLKDTVTLTDKLWILFHLCFPRRAMLPQQADGSALILFTSGSEGNPKGVVHS HASLLANVEQIRTIADFTPRDRFMSSLPLFHAFGLTVGLFTPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFL GNYARFAHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAINVPMAAKVNTVGRILPGMEARLIN VPGIAQGGRLQLRGPNIMRGYLRVENPGVLEQPSAENAQGELDANWYDTGDIVTLDEQGFCAIRGRVKRFAKLAGEMVSL ESVEQLAISLSPEGQHAAAAKTDSAKGEALVLFTTDSEITRERLIKVARENGVPELAVPRDIRVVKALPLLGSGKPDFVT LGKMAQDPEMSV >Mature_652_residues MRWLKPYVDFVALDPTNPMAIKHLVRMVEQGRPVVIFPEGRITVTGSLMKIYDGAAFVAAKSGAAVVPIRLDGPEFTHFG RLQGVLKTRWFPKISIHVLPATTIPMPQAPRSRERRVLAGEHLHTIMMAARMATVPRETLFEALLSAQTRYGRFKPCIED VSFKEDSYQTLLKKTLGVSRILQRFTVPGEHVGMLLPNATITAAAIFGASLRGRIPALLNYTSGAKGLQSAIIAASLKTI VTSRQFLEKGKLTHLPEQVNEVNWVYLEDLKDTVTLTDKLWILFHLCFPRRAMLPQQADGSALILFTSGSEGNPKGVVHS HASLLANVEQIRTIADFTPRDRFMSSLPLFHAFGLTVGLFTPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFL GNYARFAHPYDFARVRYVVAGAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAINVPMAAKVNTVGRILPGMEARLIN VPGIAQGGRLQLRGPNIMRGYLRVENPGVLEQPSAENAQGELDANWYDTGDIVTLDEQGFCAIRGRVKRFAKLAGEMVSL ESVEQLAISLSPEGQHAAAAKTDSAKGEALVLFTTDSEITRERLIKVARENGVPELAVPRDIRVVKALPLLGSGKPDFVT LGKMAQDPEMSV
Specific function: Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the ATP- dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=351, Percent_Identity=28.4900284900285, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI187761345, Length=402, Percent_Identity=26.1194029850746, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI187761343, Length=402, Percent_Identity=26.1194029850746, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI57165412, Length=407, Percent_Identity=26.2899262899263, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI57165410, Length=407, Percent_Identity=26.044226044226, Blast_Score=87, Evalue=5e-17, Organism=Escherichia coli, GI1789201, Length=649, Percent_Identity=72.1109399075501, Blast_Score=989, Evalue=0.0, Organism=Escherichia coli, GI1788107, Length=514, Percent_Identity=25.0972762645914, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI145693145, Length=355, Percent_Identity=27.887323943662, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1786810, Length=355, Percent_Identity=23.6619718309859, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17558820, Length=344, Percent_Identity=27.6162790697674, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI32563687, Length=340, Percent_Identity=28.2352941176471, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71994703, Length=508, Percent_Identity=24.6062992125984, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71994690, Length=508, Percent_Identity=24.6062992125984, Blast_Score=106, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71994694, Length=508, Percent_Identity=24.6062992125984, Blast_Score=106, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560308, Length=367, Percent_Identity=25.6130790190736, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71985884, Length=313, Percent_Identity=25.8785942492013, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17531443, Length=321, Percent_Identity=23.98753894081, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538037, Length=389, Percent_Identity=23.6503856041131, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17559526, Length=521, Percent_Identity=23.0326295585413, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557194, Length=329, Percent_Identity=23.7082066869301, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=347, Percent_Identity=25.6484149855908, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6320852, Length=349, Percent_Identity=25.5014326647564, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI18859661, Length=281, Percent_Identity=27.7580071174377, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI21355181, Length=547, Percent_Identity=24.1316270566728, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24581924, Length=546, Percent_Identity=21.2454212454212, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922652, Length=282, Percent_Identity=24.468085106383, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF01553 Acyltransferase; PF00501 AMP-binding [H]
EC number: =2.3.1.40; =6.2.1.20 [H]
Molecular weight: Translated: 71790; Mature: 71790
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLKPYVDFVALDPTNPMAIKHLVRMVEQGRPVVIFPEGRITVTGSLMKIYDGAAFVAA CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECEEEHHCCEEEEEE KSGAAVVPIRLDGPEFTHFGRLQGVLKTRWFPKISIHVLPATTIPMPQAPRSRERRVLAG CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHH EHLHTIMMAARMATVPRETLFEALLSAQTRYGRFKPCIEDVSFKEDSYQTLLKKTLGVSR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCHHH ILQRFTVPGEHVGMLLPNATITAAAIFGASLRGRIPALLNYTSGAKGLQSAIIAASLKTI HHHHHCCCCHHHEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHH VTSRQFLEKGKLTHLPEQVNEVNWVYLEDLKDTVTLTDKLWILFHLCFPRRAMLPQQADG HHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHCCHHHCCCCCCCC SALILFTSGSEGNPKGVVHSHASLLANVEQIRTIADFTPRDRFMSSLPLFHAFGLTVGLF CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH TPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFLGNYARFAHPYDFARVRYVVA HHHHCCCEEEEECCCCCEEECHHHHHCCCCEEEEECHHHHHCHHHHCCCCHHHHHHHEEH GAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAINVPMAAKVNTVGRILPGMEARLIN HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEE VPGIAQGGRLQLRGPNIMRGYLRVENPGVLEQPSAENAQGELDANWYDTGDIVTLDEQGF CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCC CAIRGRVKRFAKLAGEMVSLESVEQLAISLSPEGQHAAAAKTDSAKGEALVLFTTDSEIT CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHH RERLIKVARENGVPELAVPRDIRVVKALPLLGSGKPDFVTLGKMAQDPEMSV HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MRWLKPYVDFVALDPTNPMAIKHLVRMVEQGRPVVIFPEGRITVTGSLMKIYDGAAFVAA CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECEEEHHCCEEEEEE KSGAAVVPIRLDGPEFTHFGRLQGVLKTRWFPKISIHVLPATTIPMPQAPRSRERRVLAG CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHH EHLHTIMMAARMATVPRETLFEALLSAQTRYGRFKPCIEDVSFKEDSYQTLLKKTLGVSR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCHHH ILQRFTVPGEHVGMLLPNATITAAAIFGASLRGRIPALLNYTSGAKGLQSAIIAASLKTI HHHHHCCCCHHHEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHH VTSRQFLEKGKLTHLPEQVNEVNWVYLEDLKDTVTLTDKLWILFHLCFPRRAMLPQQADG HHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHCCHHHCCCCCCCC SALILFTSGSEGNPKGVVHSHASLLANVEQIRTIADFTPRDRFMSSLPLFHAFGLTVGLF CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH TPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFLGNYARFAHPYDFARVRYVVA HHHHCCCEEEEECCCCCEEECHHHHHCCCCEEEEECHHHHHCHHHHCCCCHHHHHHHEEH GAEKLAESTKQIWQDKFGIRILEGYGVTECAPVVAINVPMAAKVNTVGRILPGMEARLIN HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEE VPGIAQGGRLQLRGPNIMRGYLRVENPGVLEQPSAENAQGELDANWYDTGDIVTLDEQGF CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCC CAIRGRVKRFAKLAGEMVSLESVEQLAISLSPEGQHAAAAKTDSAKGEALVLFTTDSEIT CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHH RERLIKVARENGVPELAVPRDIRVVKALPLLGSGKPDFVTLGKMAQDPEMSV HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA