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The map label for this gene is 108813097

Identifier: 108813097

GI number: 108813097

Start: 3296022

End: 3296339

Strand: Reverse

Name: 108813097

Synonym: YPN_2937

Alternate gene names: NA

Gene position: 3296339-3296022 (Counterclockwise)

Preceding gene: 108813098

Following gene: 108813094

Centisome position: 72.69

GC content: 47.8

Gene sequence:

>318_bases
ATGATGAAATTAGTTGTCAGTATGGCGGTGTTACTGAGCTTGTGTAGCTTTCAGGTGTGGGCAAAAAATGATATTGAGGC
GGGGCGTGCTAAGTCATCCAGTTGTGTGGCCTGCCATGGCATGAATGGTAAAGTTTCAGTACCTATGTATCCTAACCTGG
CCGGGCAGAATGCGCTGTATCTGCAACAATCATTAGAAGCCTATAAAAAGGGGAGCCGCTCCGGCGGGCAAGCCGAGGTG
ATGCGCGCTTATGTATCCGGTTTATCCGATGAAGATTTTTCTGATTTGGCTGCGTATTATGCCAGCCTAAAGCCATAA

Upstream 100 bases:

>100_bases
CATCTGTGGTGCGGGCAGTCTATCCTCACGCGTTTAAAAACGAGTCATTGAGGGTTTGTCCGTTGTCTGGAAGAGTCCCG
TTAATTTTTGAGGAGCAATA

Downstream 100 bases:

>100_bases
ATTATATGTGGATAATAAAACAAGCCAGTCAGTGAATCGGGTGATAAATCTGCCGGGAGCTGATTTTAACGCGGCTTACA
GCGACCTTGTAGAGGCGAAG

Product: cytochrome

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MMKLVVSMAVLLSLCSFQVWAKNDIEAGRAKSSSCVACHGMNGKVSVPMYPNLAGQNALYLQQSLEAYKKGSRSGGQAEV
MRAYVSGLSDEDFSDLAAYYASLKP

Sequences:

>Translated_105_residues
MMKLVVSMAVLLSLCSFQVWAKNDIEAGRAKSSSCVACHGMNGKVSVPMYPNLAGQNALYLQQSLEAYKKGSRSGGQAEV
MRAYVSGLSDEDFSDLAAYYASLKP
>Mature_105_residues
MMKLVVSMAVLLSLCSFQVWAKNDIEAGRAKSSSCVACHGMNGKVSVPMYPNLAGQNALYLQQSLEAYKKGSRSGGQAEV
MRAYVSGLSDEDFSDLAAYYASLKP

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11292; Mature: 11292

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLVVSMAVLLSLCSFQVWAKNDIEAGRAKSSSCVACHGMNGKVSVPMYPNLAGQNALY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHH
LQQSLEAYKKGSRSGGQAEVMRAYVSGLSDEDFSDLAAYYASLKP
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMKLVVSMAVLLSLCSFQVWAKNDIEAGRAKSSSCVACHGMNGKVSVPMYPNLAGQNALY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHH
LQQSLEAYKKGSRSGGQAEVMRAYVSGLSDEDFSDLAAYYASLKP
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]