| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is aroG [H]
Identifier: 108813028
GI number: 108813028
Start: 3225720
End: 3226772
Strand: Reverse
Name: aroG [H]
Synonym: YPN_2868
Alternate gene names: 108813028
Gene position: 3226772-3225720 (Counterclockwise)
Preceding gene: 108813030
Following gene: 108813017
Centisome position: 71.16
GC content: 49.0
Gene sequence:
>1053_bases ATGAATTACCAGAATGATGATTTACGGATTAAAGAAATTAAGGAACTCCTACCTCCTGTTGCGTTGTTAGAGAAATTTCC CTCCACAGTTAATGCGGCAGAAACCGTCGCCAAGACCCGGAATGCTATTCACAACATCTTGCGTGCTCAGGATGATCGCT TGCTGGTGGTGATTGGCCCATGCTCTATTCATGATACGCAAGCGGCTAAAGAATATGCGGCCCGTTTGCTGGCACTGCGT GAAGAACTGCAGGGCGAGCTGGAAGTTGTCATGCGTGTTTATTTTGAAAAGCCGCGTACAACGGTGGGTTGGAAAGGCCT GATTAACGATCCGCATATGGACAATAGCTACGACATCAATGAAGGTTTACGTCTGGCGCGTGAATTACTCGTCGAAATTA ACGACAGCGGGTTACCGGCCGCCGGTGAGTTTTTGGATATGATTACGCCGCAGTATCTGGCTGATCTGATGAGCTGGGGA GCCATTGGCGCACGTACTACTGAATCTCAGGTTCACCGCGAACTGGCTTCTGGTCTGTCTTGCCCCGTTGGTTTTAAAAA TGGTACCGACGGCACCATTAAAGTGGCTATTGATGCGATCAACGCGGCCAGTGCCCCACACTGTTTCTTGTCGGTGACCA AATGGGGTCATTCGGCGATTGTGAATACTGCCGGCAATGGTGATTGCCATATCATTTTACGTGGTGGTAAAGAGCCGAAT TACAGCAGTAAGCATGTGAATGCGGTTAAAGAAGGGCTGATTAAAGCGGGCCTGGAACCCCAGATTATGATCGATTTCAG CCACGCTAACAGTTGCAAACAGTTTCAAAAGCAGATGGAAGTGGGAACGGATGTTTGCCAACAAATTGCGCAAGGTGAAA AATCTATCATAGGCGTGATGATCGAAAGCCATTTAGTCGAAGGTAGCCAAAACCTGGAAAGTGGTGAACCACTAACCTAT GGCCAGAGTATTACCGATGCCTGTATTGGCTGGAAAGATACTGAGGCGCTGTTGCGCCAGTTGGCTGGAGCAGTGAGAGC TCGCCGCCAGTAG
Upstream 100 bases:
>100_bases TAGCGAAAGCGATAAAGTAGATTTACAGCATTCCATTCACAGGCTAGATTGGTTCAAATATATATTGTGCAATGATCGCT AAAGACTTAATGGAAGAACT
Downstream 100 bases:
>100_bases GCTAACGCGCTTGCTATTTTGAGTCTGGGCAGGTGCGTTATCTTCACGTACAACTCGTTATCTTCATATACAGAAGAGTA CGCTTTGGTAACGGAGTGCT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNYQNDDLRIKEIKELLPPVALLEKFPSTVNAAETVAKTRNAIHNILRAQDDRLLVVIGPCSIHDTQAAKEYAARLLALR EELQGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSYDINEGLRLARELLVEINDSGLPAAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKWGHSAIVNTAGNGDCHIILRGGKEPN YSSKHVNAVKEGLIKAGLEPQIMIDFSHANSCKQFQKQMEVGTDVCQQIAQGEKSIIGVMIESHLVEGSQNLESGEPLTY GQSITDACIGWKDTEALLRQLAGAVRARRQ
Sequences:
>Translated_350_residues MNYQNDDLRIKEIKELLPPVALLEKFPSTVNAAETVAKTRNAIHNILRAQDDRLLVVIGPCSIHDTQAAKEYAARLLALR EELQGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSYDINEGLRLARELLVEINDSGLPAAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKWGHSAIVNTAGNGDCHIILRGGKEPN YSSKHVNAVKEGLIKAGLEPQIMIDFSHANSCKQFQKQMEVGTDVCQQIAQGEKSIIGVMIESHLVEGSQNLESGEPLTY GQSITDACIGWKDTEALLRQLAGAVRARRQ >Mature_350_residues MNYQNDDLRIKEIKELLPPVALLEKFPSTVNAAETVAKTRNAIHNILRAQDDRLLVVIGPCSIHDTQAAKEYAARLLALR EELQGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSYDINEGLRLARELLVEINDSGLPAAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKWGHSAIVNTAGNGDCHIILRGGKEPN YSSKHVNAVKEGLIKAGLEPQIMIDFSHANSCKQFQKQMEVGTDVCQQIAQGEKSIIGVMIESHLVEGSQNLESGEPLTY GQSITDACIGWKDTEALLRQLAGAVRARRQ
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=86.2464183381089, Blast_Score=633, Evalue=0.0, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=55.3623188405797, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1788953, Length=337, Percent_Identity=52.8189910979229, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6319726, Length=348, Percent_Identity=55.7471264367816, Blast_Score=381, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6320240, Length=353, Percent_Identity=54.1076487252125, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38295; Mature: 38295
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQNDDLRIKEIKELLPPVALLEKFPSTVNAAETVAKTRNAIHNILRAQDDRLLVVIGP CCCCCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC CSIHDTQAAKEYAARLLALREELQGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSYDIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH EGLRLARELLVEINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC CPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKWGHSAIVNTAGNGDCHIILRGGKEPN CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHCCCCCEEECCCCCCEEEEEECCCCCC YSSKHVNAVKEGLIKAGLEPQIMIDFSHANSCKQFQKQMEVGTDVCQQIAQGEKSIIGVM CCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IESHLVEGSQNLESGEPLTYGQSITDACIGWKDTEALLRQLAGAVRARRQ HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYQNDDLRIKEIKELLPPVALLEKFPSTVNAAETVAKTRNAIHNILRAQDDRLLVVIGP CCCCCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC CSIHDTQAAKEYAARLLALREELQGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSYDIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH EGLRLARELLVEINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC CPVGFKNGTDGTIKVAIDAINAASAPHCFLSVTKWGHSAIVNTAGNGDCHIILRGGKEPN CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHCCCCCEEECCCCCCEEEEEECCCCCC YSSKHVNAVKEGLIKAGLEPQIMIDFSHANSCKQFQKQMEVGTDVCQQIAQGEKSIIGVM CCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IESHLVEGSQNLESGEPLTYGQSITDACIGWKDTEALLRQLAGAVRARRQ HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]