| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812906
Identifier: 108812906
GI number: 108812906
Start: 3090858
End: 3090971
Strand: Reverse
Name: 108812906
Synonym: YPN_2746
Alternate gene names: NA
Gene position: 3090971-3090858 (Counterclockwise)
Preceding gene: 108812910
Following gene: 108812904
Centisome position: 68.16
GC content: 35.96
Gene sequence:
>114_bases TTGTGGGTGGCAGACAACCCTGATGGCATAAATAAATTACCGCAGGTGATTTGTTGGTTAATTACTGGCGGTTATTTTTT ATATAAAAAGATAACTGGTTGTATAGACACATGA
Upstream 100 bases:
>100_bases CAGTGGCGTTAGCAAGGGAACCGACATTCCGCTTGTCATAAATTAATTCAACACGCATGACTTTTTCCTGAACAATAAGT ACTGTGATAATATACAGTAT
Downstream 100 bases:
>100_bases TTTAGTTATTTTATTTTGTAATTGGTTTTTAAGGAAACGGACGGCCTGGCTAATCTATTTGCAACCAACGGGCATCAACA ACCACACCGAGTATCTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 37
Protein sequence:
>37_residues MWVADNPDGINKLPQVICWLITGGYFLYKKITGCIDT
Sequences:
>Translated_37_residues MWVADNPDGINKLPQVICWLITGGYFLYKKITGCIDT >Mature_37_residues MWVADNPDGINKLPQVICWLITGGYFLYKKITGCIDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4188; Mature: 4188
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVADNPDGINKLPQVICWLITGGYFLYKKITGCIDT CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MWVADNPDGINKLPQVICWLITGGYFLYKKITGCIDT CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA