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The map label for this gene is 108812896

Identifier: 108812896

GI number: 108812896

Start: 3082245

End: 3083753

Strand: Reverse

Name: 108812896

Synonym: YPN_2736

Alternate gene names: NA

Gene position: 3083753-3082245 (Counterclockwise)

Preceding gene: 108812897

Following gene: 108812895

Centisome position: 68.01

GC content: 52.49

Gene sequence:

>1509_bases
ATGACCATTCCTTTCACAAATATTCCCAGCAATCTGCGCACGCCACTGTTCTTTGCGGAATTTGATAATTCCCAGGCTAA
TACGGCGAGCACCACCCAGCGCACGTTGATTATTGGGCAAACACGGGCGGGCAGTACATTGCCCGCCAATATTCCACTGC
TGGTCTCATCAACCGCTACCGTTGCGGGTTTGTCTGGTGCCGGCTCTATGCTGCATGGGCAAATGGCGGCTTATCTGGCC
AATGACACCGCTGGTGAAATCTATCTTTTACCGCTGAGTGATGCTGATTCGATGGTGGCTGCCATTGGTAAAATTACCAT
CAATACGGCGGCATCGGAGACCGGTGTTATTTCACTTTATATTGGTGGGATCCGTGTGCAAACCACGGTGGTGGCGACGG
ATAGTGTCAGCACCATTGCGGCCGCTCTGGCGGCGGCGATTGAAAACCAACCTGAGTTGCCCGTCACGGTTGTTCATACC
GGTGACATGGTATCGGAAGGGGCGGTCGTGGTTCTGGAGGCGAAGAACAAAGGCGCGCATGGCAATAATATTGATCTGCG
CCTGAACTACCTGGGCAACGCTGGCGGTGAAATCACCCCTGAAAGTCTGGTACTCATGATCACCCCTATGGCAGGAGGAG
CAGGGGCACCTGAGCTGGCCGATGGGCTGGCGAATTTACAGGATCGGACGTTCGATTTCATTATTAACCCTTATACCGAT
ACGGCATCACTGGATGCGATCAAAGATTTTCTTTCTGACAGCACCGGGCGCTGGAGTTATCGCCAGCAGTTGTACGGCCA
CAGTTTTGCTGCGCAATCTGGCACCTATGGTCAGCTAACGGCGGCGGGTGAATTGCGTAACGATCAACACGCCTCACTTT
TGGGGATCCATAATTCACCCACGCCAGCACATATCTGGTCTGCCGCTTATGTCGGCGCGATTGCGCAAAGTTTGCGTAAC
GATCCGGGCCGTCCATTGCAAACACTGGCGATTCGCGGCGTATTGGCACCCCCGCTATCCAGTCGCTTTACCCTGACGGA
GCGTAACAACTTGCTGCACAGCGGTATTTCAACCGTGACAGTGGCCGATGACAGCACGGTTCAGGTGGAAAATATTATTA
CCACCTATCAGAAAAACAAATATGGCGCGGAAGATGACAGCTATCTGCAAATTGAAACCTTGTTCCTGCTGATGTTCGTC
ACCCGATTCTTGCGTACACAGGTGACCTCCAAGTTTGCCCGTATGAAGTTAGCGGCAGATGGCACGCGCTTTGCCCCTGG
CTCGGCCATTATCACGCCAAATGTGATCCGTGCTGAGCTTATCGCCCAGTATCAGACCTTGGAATTTAACGGCTATGTTC
AGGATGCCAAAGGTTTTGCCCGTGGATTGATTGTTGAGAAAAGCGCCAGTAACCCGAACCGGGTTGATGTGCTGTGGACC
GGTGTGCTGATTAATCAATTACGTATCTTTGCTGTTCTCAATCAATTCCGCCTGCAAGCGGCCGTTTAA

Upstream 100 bases:

>100_bases
CGTTTTGGCGCCGTCGCCTACAAGACGGTGATGTCGTGCAGATAGCGGCTAAACCAGCGGCATCTGTATTTGAAGAGTTA
ACAACGGAGAGTACTAAACT

Downstream 100 bases:

>100_bases
CCATAAAAAAGGAAATAAATTATGAGCGATACTTCAAACCGCCTGGCGGGTACGGCGTATGTCACCGTGGATGGCATTAC
GGTCATGGTCGCGGGTAGCT

Product: bacteriophage tail sheath protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MTIPFTNIPSNLRTPLFFAEFDNSQANTASTTQRTLIIGQTRAGSTLPANIPLLVSSTATVAGLSGAGSMLHGQMAAYLA
NDTAGEIYLLPLSDADSMVAAIGKITINTAASETGVISLYIGGIRVQTTVVATDSVSTIAAALAAAIENQPELPVTVVHT
GDMVSEGAVVVLEAKNKGAHGNNIDLRLNYLGNAGGEITPESLVLMITPMAGGAGAPELADGLANLQDRTFDFIINPYTD
TASLDAIKDFLSDSTGRWSYRQQLYGHSFAAQSGTYGQLTAAGELRNDQHASLLGIHNSPTPAHIWSAAYVGAIAQSLRN
DPGRPLQTLAIRGVLAPPLSSRFTLTERNNLLHSGISTVTVADDSTVQVENIITTYQKNKYGAEDDSYLQIETLFLLMFV
TRFLRTQVTSKFARMKLAADGTRFAPGSAIITPNVIRAELIAQYQTLEFNGYVQDAKGFARGLIVEKSASNPNRVDVLWT
GVLINQLRIFAVLNQFRLQAAV

Sequences:

>Translated_502_residues
MTIPFTNIPSNLRTPLFFAEFDNSQANTASTTQRTLIIGQTRAGSTLPANIPLLVSSTATVAGLSGAGSMLHGQMAAYLA
NDTAGEIYLLPLSDADSMVAAIGKITINTAASETGVISLYIGGIRVQTTVVATDSVSTIAAALAAAIENQPELPVTVVHT
GDMVSEGAVVVLEAKNKGAHGNNIDLRLNYLGNAGGEITPESLVLMITPMAGGAGAPELADGLANLQDRTFDFIINPYTD
TASLDAIKDFLSDSTGRWSYRQQLYGHSFAAQSGTYGQLTAAGELRNDQHASLLGIHNSPTPAHIWSAAYVGAIAQSLRN
DPGRPLQTLAIRGVLAPPLSSRFTLTERNNLLHSGISTVTVADDSTVQVENIITTYQKNKYGAEDDSYLQIETLFLLMFV
TRFLRTQVTSKFARMKLAADGTRFAPGSAIITPNVIRAELIAQYQTLEFNGYVQDAKGFARGLIVEKSASNPNRVDVLWT
GVLINQLRIFAVLNQFRLQAAV
>Mature_501_residues
TIPFTNIPSNLRTPLFFAEFDNSQANTASTTQRTLIIGQTRAGSTLPANIPLLVSSTATVAGLSGAGSMLHGQMAAYLAN
DTAGEIYLLPLSDADSMVAAIGKITINTAASETGVISLYIGGIRVQTTVVATDSVSTIAAALAAAIENQPELPVTVVHTG
DMVSEGAVVVLEAKNKGAHGNNIDLRLNYLGNAGGEITPESLVLMITPMAGGAGAPELADGLANLQDRTFDFIINPYTDT
ASLDAIKDFLSDSTGRWSYRQQLYGHSFAAQSGTYGQLTAAGELRNDQHASLLGIHNSPTPAHIWSAAYVGAIAQSLRND
PGRPLQTLAIRGVLAPPLSSRFTLTERNNLLHSGISTVTVADDSTVQVENIITTYQKNKYGAEDDSYLQIETLFLLMFVT
RFLRTQVTSKFARMKLAADGTRFAPGSAIITPNVIRAELIAQYQTLEFNGYVQDAKGFARGLIVEKSASNPNRVDVLWTG
VLINQLRIFAVLNQFRLQAAV

Specific function: Major component of the tail [H]

COG id: COG4386

COG function: function code R; Mu-like prophage tail sheath protein gpL

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein L [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007067 [H]

Pfam domain/function: PF04984 Phage_sheath_1 [H]

EC number: NA

Molecular weight: Translated: 53491; Mature: 53360

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPFTNIPSNLRTPLFFAEFDNSQANTASTTQRTLIIGQTRAGSTLPANIPLLVSSTAT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCC
VAGLSGAGSMLHGQMAAYLANDTAGEIYLLPLSDADSMVAAIGKITINTAASETGVISLY
EEECCCCCHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCEEEEE
IGGIRVQTTVVATDSVSTIAAALAAAIENQPELPVTVVHTGDMVSEGAVVVLEAKNKGAH
ECCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCC
GNNIDLRLNYLGNAGGEITPESLVLMITPMAGGAGAPELADGLANLQDRTFDFIINPYTD
CCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TASLDAIKDFLSDSTGRWSYRQQLYGHSFAAQSGTYGQLTAAGELRNDQHASLLGIHNSP
CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCC
TPAHIWSAAYVGAIAQSLRNDPGRPLQTLAIRGVLAPPLSSRFTLTERNNLLHSGISTVT
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCCCCEEEECCCCHHHCCCCEEE
VADDSTVQVENIITTYQKNKYGAEDDSYLQIETLFLLMFVTRFLRTQVTSKFARMKLAAD
ECCCCEEEHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GTRFAPGSAIITPNVIRAELIAQYQTLEFNGYVQDAKGFARGLIVEKSASNPNRVDVLWT
CCEECCCCEEECCCHHHHHHHHHHEEEEECCEEEHHHHHHHCEEEEECCCCCCEEEEEEH
GVLINQLRIFAVLNQFRLQAAV
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIPFTNIPSNLRTPLFFAEFDNSQANTASTTQRTLIIGQTRAGSTLPANIPLLVSSTAT
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCC
VAGLSGAGSMLHGQMAAYLANDTAGEIYLLPLSDADSMVAAIGKITINTAASETGVISLY
EEECCCCCHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHEEEEECCCCCCCEEEEE
IGGIRVQTTVVATDSVSTIAAALAAAIENQPELPVTVVHTGDMVSEGAVVVLEAKNKGAH
ECCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCC
GNNIDLRLNYLGNAGGEITPESLVLMITPMAGGAGAPELADGLANLQDRTFDFIINPYTD
CCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TASLDAIKDFLSDSTGRWSYRQQLYGHSFAAQSGTYGQLTAAGELRNDQHASLLGIHNSP
CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCC
TPAHIWSAAYVGAIAQSLRNDPGRPLQTLAIRGVLAPPLSSRFTLTERNNLLHSGISTVT
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCCCCEEEECCCCHHHCCCCEEE
VADDSTVQVENIITTYQKNKYGAEDDSYLQIETLFLLMFVTRFLRTQVTSKFARMKLAAD
ECCCCEEEHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GTRFAPGSAIITPNVIRAELIAQYQTLEFNGYVQDAKGFARGLIVEKSASNPNRVDVLWT
CCEECCCCEEECCCHHHHHHHHHHEEEEECCEEEHHHHHHHCEEEEECCCCCCEEEEEEH
GVLINQLRIFAVLNQFRLQAAV
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]