Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812892

Identifier: 108812892

GI number: 108812892

Start: 3079940

End: 3081433

Strand: Reverse

Name: 108812892

Synonym: YPN_2732

Alternate gene names: NA

Gene position: 3081433-3079940 (Counterclockwise)

Preceding gene: 108812893

Following gene: 108812891

Centisome position: 67.95

GC content: 41.9

Gene sequence:

>1494_bases
ATGACTGAGATATTTGATTTTGACCTGGCTATCGATGCTCAGGTCACTGAATCAGTGAGTCAAATGAATAAGGCAATAAA
AGCATTAGTGCCTCAATTTAATGAATTACGTAAAAGTGTGGAAGCGATTAATCACGTTATCCCCTTGTTCATTATGCGGA
TAGAAGGATTTCATAATGAATACGGCAACATAAGTGGGGGGACCAGAACATCTTCGGACAATAGCTTAATGACAAGTATT
GCTAACATTGCTAATAGCTATATAACAGGAGGGAAATTTAATCTTATTTATACGATTGGTTCTGAATTTGCCAGTGCAGT
CAGCCAGGCAGCCAGCGAAGCCCGAACGGTAAATAAAGTCACGCAAAATGCGGGTGCACCTATTGATCAATTCAGTCAAC
TATATGGGGCGATGCAAATTCGTGGTACAGACCAAGAAGCCGCAATAAAATCGACTGAACGGCTCTATAACACGTTTAAT
AATATACTTTGGCGACGTGATGAGCAGGGTTGGAATCTGTTACAAGATTATGGTTTAGACATTGCCAGTAATAAAAATGG
AACAGTGGATGCTCCTACTACGTTGACGAATATGGCTAAAGAATTTCCACAAATGGCACCACAGGACCAACACCAACTGA
TCCATATTCTCAGAATGGACTCTAATGCTATTGAGTTATTGCGCGAGGGGGGGCAGCTAACGGATTTACTGGCTAAATCA
AGACAATATGGCCTAACGATTGATCCTCAACTTAATGCCCGATTAACTGAGTTAAACATACGAACGAATGAATTAAGTAT
GGCTTGGGATGGCCTCAAAGGTAAGGCATCGAATAAGCTTTACGATGTATTGTTCTCTGACGGTACGATTGCCGACGGAA
TAGGTGGCCTTACCGACATGATAACTTATGGCCCAGATAACTTTTCGATTATGCGTACCCTAGGGGTAACCCAAGGGATT
GATACGGATAAAATGCGTCGGGGTTATAACGATGCTGATTTTTATCAGCAACTTAATTTTTATGAAAAAGCCATGCTTAG
TGCGGGACTGATGACCGATGGATTTCGTAAAAAATATCAGGGAAATAATGAAGAGAAAAATGCGACTTCGGCAGTTAATG
CAGTGGCAATTAATACTGTGGCCATTAATAGCGACATTCCTGAATTCAATCTAGGAAAAGATCTGTTTAATTTTGGGGCT
GAAACCGAAAATACTTGGAAAAATAACTGGCTTACAGATATTCACGCGGAAGAACCCTCATCCGACTTTGGCTATAATGA
TATTGACATCAATCCTGTCAATCTATCACTTATTTCCCCTGAATCAGCGGGTGACTTTAACGGCAACGCTATTGCTGATG
TCATTGCCACCGCAATGCAAAATAACCGGGTGCAAATTGAGCTGACATTAATCGACAGCCGGACTGGTGAAACTTCGCTG
ATCCAAGCGCAGGGCGGGGCCAGAATTGCCCACGCCATGGAACTCGGTCATTAA

Upstream 100 bases:

>100_bases
TATAGCTGGGGGCCGGGCGATGCCTGGTCCCTGACCTACAGTGGATTAAGGTGGTGGTGCCAGCAGGCCGAGCGGATTAA
TAATATTAAGGCTGGCAAAA

Downstream 100 bases:

>100_bases
TTTAAGTAAAAACGCAATGTAGTCAACCCGCCCCTGTGGGTTTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAAC
GGTGAGGATAGGCAGAGGAG

Product: bacteriophage coat protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSI
ANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFN
NILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS
RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGI
DTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGA
ETENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL
IQAQGGARIAHAMELGH

Sequences:

>Translated_497_residues
MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSI
ANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFN
NILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS
RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGI
DTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGA
ETENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL
IQAQGGARIAHAMELGH
>Mature_496_residues
TEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSIA
NIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNN
ILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKSR
QYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGID
TDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAE
TENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSLI
QAQGGARIAHAMELGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54783; Mature: 54652

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNE
CCCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YGNISGGTRTSSDNSLMTSIANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
TQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNNILWRRDEQGWNLLQDYGLD
HHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCE
IASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS
EECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHHCCCHHHHHHHHH
RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDM
HCCCEEECCCCCCEEEEEEEEECHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
ITYGPDNFSIMRTLGVTQGIDTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQ
HEECCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
GNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAETENTWKNNWLTDIHAEEPS
CCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
SDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL
CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCEE
IQAQGGARIAHAMELGH
EEECCCCHHHHHHHCCC
>Mature Secondary Structure 
TEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNE
CCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YGNISGGTRTSSDNSLMTSIANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
TQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNNILWRRDEQGWNLLQDYGLD
HHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCE
IASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS
EECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHHCCCHHHHHHHHH
RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDM
HCCCEEECCCCCCEEEEEEEEECHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
ITYGPDNFSIMRTLGVTQGIDTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQ
HEECCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
GNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAETENTWKNNWLTDIHAEEPS
CCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC
SDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL
CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCEE
IQAQGGARIAHAMELGH
EEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA