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The map label for this gene is psaF [H]

Identifier: 108812838

GI number: 108812838

Start: 3021516

End: 3022016

Strand: Reverse

Name: psaF [H]

Synonym: YPN_2677

Alternate gene names: 108812838

Gene position: 3022016-3021516 (Counterclockwise)

Preceding gene: 108812839

Following gene: 108812837

Centisome position: 66.64

GC content: 34.53

Gene sequence:

>501_bases
ATGCAAACAGCAATGAAAGCAAAATCACTTACTCTCATATCTATAACAGTAATGTTTTTCTTATTTTTAATCTATAGCTT
TAATGACTTATTTTTTTATTCTGAAGTGAAATATGGCGATATCCATGAGCATCTTGATTTAAGAATGCAAGGGATAAGAT
TTAGCCTCTCACATTATATTATTGATGATAAGTCTCAACTGGTGATTTCAGAGGGAATATATGGTATTGGTTTGAAAATG
CCAACGGGGAAGTATTACCTATTCCCTCTTCATTCATATCAGTCATCCCCTGATAATATGGCCAGAGGATCGCTGAATTC
ATTGGCCTCACCGTTGTCTTTGTATGTCTATGAAATACATAATAAAAAAAATAACGTTGTCACCTTTTTTAATGGTGACA
GAGGCTTTATTGATGTCAATGGAGAAACGATCCACTTATCTTCTCTGTTTCTCGGGGTACAAGGAGAACATATCCATACG
TCCTATCATGACGTTAGTTAA

Upstream 100 bases:

>100_bases
CAACCAAGATGAATGGCCCAACGGCAGGCTTACCGAAGGTGAAGAATAGTATGATATTTAAGGATGATTTTGGTTTAGTC
ATTATCTGTGATCAATCGGA

Downstream 100 bases:

>100_bases
TCATTTTATCTATTGATTTTCTATTTTAGATGACATTTTTAAATAATAAATATGGCGTCTGTCTATATTGGTATCTTTAG
AACCGTTTTTTACTCCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQTAMKAKSLTLISITVMFFLFLIYSFNDLFFYSEVKYGDIHEHLDLRMQGIRFSLSHYIIDDKSQLVISEGIYGIGLKM
PTGKYYLFPLHSYQSSPDNMARGSLNSLASPLSLYVYEIHNKKNNVVTFFNGDRGFIDVNGETIHLSSLFLGVQGEHIHT
SYHDVS

Sequences:

>Translated_166_residues
MQTAMKAKSLTLISITVMFFLFLIYSFNDLFFYSEVKYGDIHEHLDLRMQGIRFSLSHYIIDDKSQLVISEGIYGIGLKM
PTGKYYLFPLHSYQSSPDNMARGSLNSLASPLSLYVYEIHNKKNNVVTFFNGDRGFIDVNGETIHLSSLFLGVQGEHIHT
SYHDVS
>Mature_166_residues
MQTAMKAKSLTLISITVMFFLFLIYSFNDLFFYSEVKYGDIHEHLDLRMQGIRFSLSHYIIDDKSQLVISEGIYGIGLKM
PTGKYYLFPLHSYQSSPDNMARGSLNSLASPLSLYVYEIHNKKNNVVTFFNGDRGFIDVNGETIHLSSLFLGVQGEHIHT
SYHDVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18961; Mature: 18961

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAMKAKSLTLISITVMFFLFLIYSFNDLFFYSEVKYGDIHEHLDLRMQGIRFSLSHYI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHEEEECEEEEEEEEE
IDDKSQLVISEGIYGIGLKMPTGKYYLFPLHSYQSSPDNMARGSLNSLASPLSLYVYEIH
ECCCCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHCCCCEEEEEEEE
NKKNNVVTFFNGDRGFIDVNGETIHLSSLFLGVQGEHIHTSYHDVS
CCCCCEEEEECCCCCEEEECCCEEEEEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MQTAMKAKSLTLISITVMFFLFLIYSFNDLFFYSEVKYGDIHEHLDLRMQGIRFSLSHYI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHEEEECEEEEEEEEE
IDDKSQLVISEGIYGIGLKMPTGKYYLFPLHSYQSSPDNMARGSLNSLASPLSLYVYEIH
ECCCCEEEEECCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHCCCCEEEEEEEE
NKKNNVVTFFNGDRGFIDVNGETIHLSSLFLGVQGEHIHTSYHDVS
CCCCCEEEEECCCCCEEEECCCEEEEEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]