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The map label for this gene is 108812830

Identifier: 108812830

GI number: 108812830

Start: 3010066

End: 3011211

Strand: Reverse

Name: 108812830

Synonym: YPN_2669

Alternate gene names: NA

Gene position: 3011211-3010066 (Counterclockwise)

Preceding gene: 108812831

Following gene: 108812829

Centisome position: 66.41

GC content: 47.47

Gene sequence:

>1146_bases
GTGAAATGTGTTTCACTGAAAATGGCTAAAGGGTTAACTATCAGTTTGTTATTCGGCTGGGCCTTGATGGCTGGCTCTAG
TGCCTTGGCGGCAACAGTGACTGACATGGCTGGCCGTACGGTCACCATACCGGCTAAAGTTGAGCGTATTTTACTGGGTG
AAGGGCGCTTGTTCTATGCTGTCTCTTTATTGGAAGGTAATAAACCGTTAGACCGTATTGTTGGCTGGCAGGGCGATTTT
CGCAAACTGGATCCCCAAACTTACGCCATCTATAAAGCAAAATTCCCGCAAATTGATCAAATCCCCCTTATTGGTAACAC
GACCGCTGACAGTATCAGCCCGGAAAAGGTGCTCACCTTAAATCCGGATATCGCTATTTTTGGTTTATCTGGCCATGGTC
CAGGTAAAGGCAGTGAATTAGTCAAGCAACTAGAGAAAGCCGGTGTACCGGTCGTTTTCGTGGATTTCCGTAATTCGCCA
TTAAAGAACACGTTGCCAAGTATGCGCTTGCTGGGCAAAGCCCTGCACCGCGAACAGCAAGCTGAAAACTACATTAATTT
TTATCAAGATAATGTGGACAAGGTGACCGATATCACCAATAAAATCCCGGAAGATAAAAAACCGAGCGTATTTATTGAAT
TACGTGCAGGGGCGTCGGAAGAGTGCTGTGGTACTGCCGGGAAGGGCAATATGGGCGACTTTATCGATCAGGCGGGCGGC
AATAATATTGCTAAAAATCTGCTGCCTGGCTCGCTAGGTACGGTGAATTTAGAAAAAGTATTGGCGGCGAAACCAGATAT
CTACATTGCCAGCGGGGGCAAATCACCAGGCAGCGATGCACCGGGTGTCGTCCTTGGTGCGCAGGTAACGCCCGAGCAGG
CACAGGCCTCGTTGCAAAAAATTCTGGGCCGTAAGGGAATCAATACCCTAAGTGCGGTCAACACGGGTCATAGCTATGCG
ATTTGGCACAATTACTACAATTCACCGTATAACGTATTGGCAATTCAAAGCTTTGCCAAATGGTTCTATCCAGAGCAATT
TGCTGATCTCGATCCGAAAAAAACCATGGACAGCCTGTATTCACAGTTTCTGGCCGTCGAGCCAAGTGGCACCTATTGGA
TTGAAGCAAAAAGAGAGTTGGATTGA

Upstream 100 bases:

>100_bases
CAAAAAGTTACGTCCAATTACTTATGGCAATCTTATTGATAAGTATTATCATTTGCTTTATTGTTAGCGCCATCTTATGG
GAACAGGTAAGGGGTTTGGC

Downstream 100 bases:

>100_bases
AGCAAAAATAGTTGGATTGAAGTAAAAATAGTTGGATTGAAGCCAAAAAATAGCCGGCGCGAAGTGGCCGAGTGAATGTG
AAGTAACCTAATCCGTACTA

Product: periplasmic substrate-binding transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDRIVGWQGDF
RKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSP
LKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGDFIDQAGG
NNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSAVNTGHSYA
IWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD

Sequences:

>Translated_381_residues
MKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDRIVGWQGDF
RKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSP
LKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGDFIDQAGG
NNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSAVNTGHSYA
IWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD
>Mature_381_residues
MKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYAVSLLEGNKPLDRIVGWQGDF
RKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTLNPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSP
LKNTLPSMRLLGKALHREQQAENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGDFIDQAGG
NNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQKILGRKGINTLSAVNTGHSYA
IWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLYSQFLAVEPSGTYWIEAKRELD

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41315; Mature: 41315

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYA
CCEEEEEHHCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHEEEEEECCCCEEEE
VSLLEGNKPLDRIVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTL
EEEECCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEE
NPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSPLKNTLPSMRLLGKALHREQQ
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGDFIDQAGG
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHCCC
NNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQK
CHHHHHCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHH
ILGRKGINTLSAVNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLY
HHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCHHHCCCCHHHHHHHHH
SQFLAVEPSGTYWIEAKRELD
HHHEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MKCVSLKMAKGLTISLLFGWALMAGSSALAATVTDMAGRTVTIPAKVERILLGEGRLFYA
CCEEEEEHHCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHEEEEEECCCCEEEE
VSLLEGNKPLDRIVGWQGDFRKLDPQTYAIYKAKFPQIDQIPLIGNTTADSISPEKVLTL
EEEECCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEE
NPDIAIFGLSGHGPGKGSELVKQLEKAGVPVVFVDFRNSPLKNTLPSMRLLGKALHREQQ
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AENYINFYQDNVDKVTDITNKIPEDKKPSVFIELRAGASEECCGTAGKGNMGDFIDQAGG
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHCCC
NNIAKNLLPGSLGTVNLEKVLAAKPDIYIASGGKSPGSDAPGVVLGAQVTPEQAQASLQK
CHHHHHCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHH
ILGRKGINTLSAVNTGHSYAIWHNYYNSPYNVLAIQSFAKWFYPEQFADLDPKKTMDSLY
HHHHCCCCHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCHHHCCCCHHHHHHHHH
SQFLAVEPSGTYWIEAKRELD
HHHEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]