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The map label for this gene is yadA [H]

Identifier: 108812750

GI number: 108812750

Start: 2915611

End: 2917458

Strand: Reverse

Name: yadA [H]

Synonym: YPN_2589

Alternate gene names: 108812750

Gene position: 2917458-2915611 (Counterclockwise)

Preceding gene: 108812751

Following gene: 108812749

Centisome position: 64.34

GC content: 38.85

Gene sequence:

>1848_bases
ATGCAACGGATGCAATGCATATATATCGCCACTTGGTTAATCGCAGTATTTACTTCGCCGATAGTGATAGCTAACAATAC
GAATATTAATGGCAGTACCAATAATAACGGTAATGGTACAATCAATATTTTTGACGCCAGCAGTAATAACGATATTCATA
CACTAACCGGTCTTGGTAATGAGCAGTTGGGAGGATTTAGTAATCATCTTATCGACTCTCATAATAATACGATAGACGGT
GGTCAGAGTAACAACCTGGTAAGTAGCGATGGCAATATGATCAGCGCCATTAGCTTGGGCGATGGCCTCTTCTACGGCGC
GCAGAATAACACGTTAATAAACTCAAACAACAACCTACTTATTGTCACTCAGGGCAGTACTATAATAGATTCTGATAGTA
ATACTGTGTCTGGCATTAGTAATAATCTTATAGAGAGCAACAGCAATATTATCGGTAATGAAAATAGTTGTTATTCGGAT
CCCGCGTCCCCATCAGGAGCGTGGTGCGTTGACAATCAAAATACGCTCATTGGCAGTGATAACAATACGATCACTGGTGC
GCTGAATGGTCTTCACAACAGTCATAACAATGATATTATTGCTAGCTCTGTAAATAATTTAATGGATACGCATAATAATA
TTATCGCGGGAGGGCACTACAACACCATTAGTGGTGGTGGAAACAATGACATTTTTGGGAGTGAAAACAATGTTACTGAC
AGCACCGACGCCAATATCAATGGTAGTAATAACTACGTGATAGATGGGAATGGAATTGGTCGAGATGATTTGACTGAAGA
TAACTCTATATTGGGCGGCTCTGGCAATATGGGCGTGGGGGATTCAGTAACCGCGATTACCAATAGCGTGGTGTTCGGCG
GTAATACATCTGGTAATTCAACCGGCTCCACTCTGACAGATTCTGTATCGGTTAGCGGCAACGGTACATCGGGGAATAAT
GTCGTTAATATCGGCGGAGCGGCAAACGGTAATAATAGTGCTAGCTTAGGTACAGGCTCGGTATCCTCTGAAGGAGGAAT
TGCATTGGGTAGCGGTTCGATTGCTACACGGAATGATGAACTGAATATCGGTGATAGACAAATTACCAGCGTTAAAAAAG
GTGTTGAGAATACAGATACAATCAATGTTAGTCAGTTAAACGATAGCTTTGATGATGTTCTGAATTTATCAAATGAATAT
TCTGACAACTCTTTTTCCACTGTCACTGAAAATATAAATAATTATACTGATGCCTCATTAGATACTGTGTTGAATACAAC
TGGTGAATATACCGACAACTCAATATTATTGGTTACTAATGAAAGCAATAATTATACTGACAATGGCATGGAGAGTGTTA
GTAATTATGCAAATATCTATGCTGATGAATCTTTGTTAGCTATCTATAATGAAGAGGCTAATTACATGTCTAATCTTATA
GATGTGACGTTAAATAATGCTAATAACTATACTGATCTTTCAGTTAATACCATTATATATACCGGAAAACAATATACAGA
CTCTCGAATCAATGAGTACCAACGTACTTTTAAAAATGAATTTTTAACCTATTCTAATGGAAAATTTGGCGGTTTTGATA
AAGATATTAATCAAAAGCAGAAACAATTAAACGCGGGAATAGCGGCGACGATGGCTGCTGCGGTTATTCCTCAAAAATCG
GGTTCTAAAGTCTCTATTGGTGTCGGGCTTGCAGGATATAGCGATCAAGGCGCAGGATCTGTGGGAGCGATTTGGCATGT
AAATCAACGAATCACAATGAATACAACGATGACTTACGATACTCAACGTGGTGTTAGTTTATTAACGGGTTTATCTATCG
GCATATGA

Upstream 100 bases:

>100_bases
CGATAACGCGAGTCAATGTTTCTGCCGACACTGAAGGCGGTGTCGGTGTTGCAGCGGGTTTTGCTTTTGGCATTAATTAA
TGAATAAGGAAATTAAACGG

Downstream 100 bases:

>100_bases
TCGATACCCGTCGTCCTTCAAGATGTAGGGGGAAGCGGCCCTTATTACTCGGCCCGTCCTTGGGCCTCGCCTCTGCGAGG
CCGCTGCAAGCAGCGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MQRMQCIYIATWLIAVFTSPIVIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNEQLGGFSNHLIDSHNNTIDG
GQSNNLVSSDGNMISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDVLNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVTNESNNYTDNGMESVSNYANIYADESLLAIYNEEANYMSNLI
DVTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI

Sequences:

>Translated_615_residues
MQRMQCIYIATWLIAVFTSPIVIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNEQLGGFSNHLIDSHNNTIDG
GQSNNLVSSDGNMISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDVLNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVTNESNNYTDNGMESVSNYANIYADESLLAIYNEEANYMSNLI
DVTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI
>Mature_615_residues
MQRMQCIYIATWLIAVFTSPIVIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNEQLGGFSNHLIDSHNNTIDG
GQSNNLVSSDGNMISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDVLNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVTNESNNYTDNGMESVSNYANIYADESLLAIYNEEANYMSNLI
DVTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI

Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008640
- InterPro:   IPR008635
- InterPro:   IPR008126
- InterPro:   IPR005594 [H]

Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]

EC number: NA

Molecular weight: Translated: 64381; Mature: 64381

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRMQCIYIATWLIAVFTSPIVIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGN
CCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC
EQLGGFSNHLIDSHNNTIDGGQSNNLVSSDGNMISAISLGDGLFYGAQNNTLINSNNNLL
HHCCCCHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEECCEEEECCCCCEEEECCCCEE
IVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSDPASPSGAWCVDNQNTLIGSD
EEECCCEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECC
NNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
CCEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCCCCC
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNS
CCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCHHEEECEEEECCCCCCCC
TGSTLTDSVSVSGNGTSGNNVVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDE
CCCEEECEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCC
LNIGDRQITSVKKGVENTDTINVSQLNDSFDDVLNLSNEYSDNSFSTVTENINNYTDASL
CCCCCHHHHHHHHCCCCCCEEEEHHCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHH
DTVLNTTGEYTDNSILLVTNESNNYTDNGMESVSNYANIYADESLLAIYNEEANYMSNLI
HHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCHHHHCCEE
DVTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQ
EEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHH
KQLNAGIAATMAAAVIPQKSGSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYD
HHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEEC
TQRGVSLLTGLSIGI
CCCCHHHHHHHCCCC
>Mature Secondary Structure
MQRMQCIYIATWLIAVFTSPIVIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGN
CCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC
EQLGGFSNHLIDSHNNTIDGGQSNNLVSSDGNMISAISLGDGLFYGAQNNTLINSNNNLL
HHCCCCHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEECCEEEECCCCCEEEECCCCEE
IVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSDPASPSGAWCVDNQNTLIGSD
EEECCCEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECC
NNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
CCEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCCCCC
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNS
CCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCHHEEECEEEECCCCCCCC
TGSTLTDSVSVSGNGTSGNNVVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDE
CCCEEECEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCC
LNIGDRQITSVKKGVENTDTINVSQLNDSFDDVLNLSNEYSDNSFSTVTENINNYTDASL
CCCCCHHHHHHHHCCCCCCEEEEHHCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHH
DTVLNTTGEYTDNSILLVTNESNNYTDNGMESVSNYANIYADESLLAIYNEEANYMSNLI
HHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCHHHHCCEE
DVTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQ
EEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHH
KQLNAGIAATMAAAVIPQKSGSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYD
HHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEEC
TQRGVSLLTGLSIGI
CCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2761389; 7934875; 2592347; 1548243 [H]