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The map label for this gene is pqiB [H]

Identifier: 108812717

GI number: 108812717

Start: 2866106

End: 2867785

Strand: Reverse

Name: pqiB [H]

Synonym: YPN_2556

Alternate gene names: 108812717

Gene position: 2867785-2866106 (Counterclockwise)

Preceding gene: 108812718

Following gene: 108812716

Centisome position: 63.24

GC content: 47.26

Gene sequence:

>1680_bases
ATGAAACAACTCAGAAGGAGCCGCAAGGTGACGGACAATAATCCCAGCCAGAGTGTGGCGGAAATTGAAAAAATCAAGCG
ATGGTCACCGGTATGGATCATCCCGATCGTCACTGCGCTGATCGGCGCATGGATACTGTTTTATCATTTCAGTAATCAAG
GGCCACAGGTCGTTTTGACCACTCTAAATGCTGAAGGTATTGAGGCGGGGAAAACCAAGATAAAGAGCCGTAGCGTGGAT
GTTGGTATGGTTGAAAAGGTCACGTTGAGTGAAGATCTTAACCATGTGATCATACAGGCCCGGTTAAATTCTGGCATGAA
TACCCTGTTACACGGTGATACAGTTTTCTGGGTGGTAAAACCGCAGATTGGCCGTGAAGGGATCTCTGGTTTAGGGACTC
TACTCTCCGGTGCGTATATTGAGCTGCAACCGGGCAGTAACGGTAAGGCACTAAATGAATTCCGTTTATTGGATTCCCCA
CCGCTTGCCTCACCAGATGCGAAAGGTTTACGGATTATGCTGGATAGTGATCAAGCGGGGCAGTTGAATGCCGGTGATCC
GGTACTGTTCCGCGGTTATCGCGTAGGTTCCGTAGAAACCAGTACGTTTGATCCTCAATCCCGTTTGATGCGTTACCAGC
TATTTATTGGCGCGCCTTATGACAGCCTGGTGACCAGTAACGTCCGTTTCTGGAAAGACAGTGGTGTTGCTGTGGATCTG
TCTTCACAAGGCATGCGTGTGGAGATGGCATCGTTGGCGACATTATTCAGCGGTGGAGTCAGTTTTGATGTACCCGATGG
TTTAGAACAAGGTAAGCCCGTCACGCAGGATAAAGCGGAGTTTAAGCTGTTTGATGACCGTAGCAGCATTCAGAACTCTT
TATACATTGAACATGAAAACTTCTTATTGTTCTTCTCTGATTCTGTCCGTGGGCTACAGTCTGGCGCACCGGTAGAATTC
CGCGGGATCCGTGTTGGTACGGTCGGAGATGTTCCCTTCTTCGCTGAGGGGATGAAGCAGCAAGTCGATAATGATTTCCG
TATTCCAGTATTAATTCGCATTGAGCCGGGCCGTTTCCGTGATGATTTAGGTCCAGATACCAATTTTGAACAGGTACTGA
AAACCGCCAAAGAGCGTGGTTTACGTGCATCATTGAAGTCTGGCAACTTACTGACTGGTGCACTGTTCGTCGATCTGGAT
TTTTATCCCGATGCGAAACCGTGGAAAGGGCCGCAAGAAATTGCTGGTTATCCTTTGTTGCCGACAATCAGTGGTGGTTT
GGCTCAAATCCAACAGAAAGTCATGCAAACACTGGATAAGATTAATAATCTGCCACTGAATCCAATGGTGAATGAAGTCA
CGAAGGCATTGGCTGAAAGCCAGAAGACAATGCGTGAAACCCAGAAAGTTCTAGCTTCACTTAATACAATCACGTCCAGT
CAGTCGATGCAGGAGCTACCAAAAGATCTGCAAAAAACACTGAATGAACTGAATCGTAGTATGAAAGGCTTCCAACCTGG
TTCACCGGCCTACAATAAAATGGTGGGTGACATGCAGCGGTTAGATCAGGTCTTGCGTGAATTACAACCGGTATTGCGAA
CACTGAATGAGAAGAGCAATGCGCTAGTATTTGAAGCAGCAGGAAGTCAGGATCCTCAGCCTAAGAAGGCCAAAAAATGA

Upstream 100 bases:

>100_bases
ATCTACCCGGCGATTGGGGCACTACTGTTTGCGATGGTTGTGATCCTGACAATGTTTTCCGCATTAACGTTTGATCCTCG
TTTAACCTGGGATCGAATCA

Downstream 100 bases:

>100_bases
TGAAATGGATGGCAGTTATCGTCGCGCTGTTACTCAGTGCTTGCAGCAGCGAAACCAGCAAGACGTACTATCAGTTACCG
GCACTTAATCAGTTACCGGC

Product: paraquat-inducible protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKQLRRSRKVTDNNPSQSVAEIEKIKRWSPVWIIPIVTALIGAWILFYHFSNQGPQVVLTTLNAEGIEAGKTKIKSRSVD
VGMVEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVKPQIGREGISGLGTLLSGAYIELQPGSNGKALNEFRLLDSP
PLASPDAKGLRIMLDSDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDL
SSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEF
RGIRVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLD
FYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSS
QSMQELPKDLQKTLNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKKAKK

Sequences:

>Translated_559_residues
MKQLRRSRKVTDNNPSQSVAEIEKIKRWSPVWIIPIVTALIGAWILFYHFSNQGPQVVLTTLNAEGIEAGKTKIKSRSVD
VGMVEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVKPQIGREGISGLGTLLSGAYIELQPGSNGKALNEFRLLDSP
PLASPDAKGLRIMLDSDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDL
SSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEF
RGIRVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLD
FYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSS
QSMQELPKDLQKTLNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKKAKK
>Mature_559_residues
MKQLRRSRKVTDNNPSQSVAEIEKIKRWSPVWIIPIVTALIGAWILFYHFSNQGPQVVLTTLNAEGIEAGKTKIKSRSVD
VGMVEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVKPQIGREGISGLGTLLSGAYIELQPGSNGKALNEFRLLDSP
PLASPDAKGLRIMLDSDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDL
SSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEF
RGIRVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLD
FYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSS
QSMQELPKDLQKTLNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKKAKK

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=540, Percent_Identity=69.4444444444444, Blast_Score=784, Evalue=0.0,
Organism=Escherichia coli, GI87081984, Length=318, Percent_Identity=31.7610062893082, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 61783; Mature: 61783

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLRRSRKVTDNNPSQSVAEIEKIKRWSPVWIIPIVTALIGAWILFYHFSNQGPQVVLT
CCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEE
TLNAEGIEAGKTKIKSRSVDVGMVEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVK
EECCCCCHHHHHHHHHCCCCCCHHEEEEHHHCCCEEEEEEECCCCCCEEEECCEEEEEEC
PQIGREGISGLGTLLSGAYIELQPGSNGKALNEFRLLDSPPLASPDAKGLRIMLDSDQAG
CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCCCCCEEEEECCCCCC
QLNAGDPVLFRGYRVGSVETSTFDPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDL
CCCCCCCEEEEEEEECCEECCCCCHHHHHEEEEEEEECCHHHHHHCCCEEEECCCEEEEE
SSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHEN
CCCCCEEHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCEEEECCHHHHCCCEEEEECC
FLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFR
EEEEEECCCCHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC
DDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYPDAKPWKGPQEIAGYPLL
CCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHCCCCCC
PTISGGLAQIQQKVMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSS
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
QSMQELPKDLQKTLNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALVFEAAGSQDPQPKKAKK
EEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKQLRRSRKVTDNNPSQSVAEIEKIKRWSPVWIIPIVTALIGAWILFYHFSNQGPQVVLT
CCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEE
TLNAEGIEAGKTKIKSRSVDVGMVEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVK
EECCCCCHHHHHHHHHCCCCCCHHEEEEHHHCCCEEEEEEECCCCCCEEEECCEEEEEEC
PQIGREGISGLGTLLSGAYIELQPGSNGKALNEFRLLDSPPLASPDAKGLRIMLDSDQAG
CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCCCCCEEEEECCCCCC
QLNAGDPVLFRGYRVGSVETSTFDPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDL
CCCCCCCEEEEEEEECCEECCCCCHHHHHEEEEEEEECCHHHHHHCCCEEEECCCEEEEE
SSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHEN
CCCCCEEHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCEEEECCHHHHCCCEEEEECC
FLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFR
EEEEEECCCCHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC
DDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYPDAKPWKGPQEIAGYPLL
CCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHCCCCCC
PTISGGLAQIQQKVMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSS
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
QSMQELPKDLQKTLNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALVFEAAGSQDPQPKKAKK
EEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]