| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812656
Identifier: 108812656
GI number: 108812656
Start: 2799671
End: 2800729
Strand: Reverse
Name: 108812656
Synonym: YPN_2495
Alternate gene names: NA
Gene position: 2800729-2799671 (Counterclockwise)
Preceding gene: 108812657
Following gene: 108812655
Centisome position: 61.76
GC content: 40.51
Gene sequence:
>1059_bases ATGGCAAAAGGCTATTACCTTGGGGTTGGGGATGAAACAACCTGCGGCGGCGTGATCATCGAAGGTGACGCCACACATGT CTTGATGGGTAAAGCGGTGGCCCGTGAACAAGACAGAGTGACCTGCGGTAAACATCCGGGAACCTATATTATTATCGGCC ATGTTCCTGGCGATTCGGTAAATGGCCGCAAGTTTGCGGGCACCTTGAATAGTCAAAGCAATTGCCCGTGCAAGGCGTGG TTTATTCCTTCTTTGGTGCATGATACGTATGAGTTTGGTGCAAGAAGTAAATCACAAAATATGTCTGAAATTAGTACTGA AGTCGAACGTGAGATGGTAGAAAATGTGAGTGAATCAGAAGAAAAATCTAAAGTTGTCTGTGCCCATATTGATGGCGCTT TAGTAGTAGCGAGTTATATCCTTGATGAAATAAAGAAAAATGTAAAAAGTGATACCGCTGATAAAATCAGATCTTTTATC GATAATGACCTCTATAAAAAAAGACTTAAGGAGTGGCAGGATTCTCCTTGGTACGCGAGAATGAATGCACCTCCACAGCC TGAAATAATATCGGCATCGGTTTTATGGTTTATGGCGGTCAAGAGTGGTGCTAAATGGGATCATAAACCTAAAATTAGAG ATCAATTTAAAGCATATGCAGTTTCTCGTCCTCTGGTCGGAAGCGGAACCCGATCAAAAAGCTATTTTCATAAATATGAA GAACATGATTATTTTTATGATGTCTGGTCCAATATTCACTATGGTTATGTAGGCTTAAGTCTTGGTTTTGATGAGTCATA TTTATTACTTGGCTCAACTCTTGAGCAAGTAAGAACCAGCATCGGGAGTAAACCAGATCCTATAGATGATATTACATGTA TGAAAATTGGCTATGCACTCTATCATCAACATGGAAAATATGCTGAGACGTTAGATGTCAGGCATATACTCGATGCTCTT GAATCAGCATCGGACCTTGATCTAGCTATTTCAAGACAAATTCATTGGTGTTGGAATAATGATAATTCGAGTCAAATTGA TCACCCGCAGGGTAAGTAA
Upstream 100 bases:
>100_bases CCCGCCTGCATGCTGAAATGGAAAGCCTGCTCAGTGGGCTTATCGCCCTCGACCCGGCCCGTGCGGCCGTATTATGCGGA TAACAGAGAAGGAACAGACA
Downstream 100 bases:
>100_bases TGAAAAGAATAATAATGGTTGTTACGATTTTTATCGTATTAGGAATTATTTCTATCACTGTTTTTTATTTTGTTAAGCCT TCTATTTTTCTTTATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNSQSNCPCKAW FIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFI DNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDAL ESASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Sequences:
>Translated_352_residues MAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNSQSNCPCKAW FIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFI DNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDAL ESASDLDLAISRQIHWCWNNDNSSQIDHPQGK >Mature_351_residues AKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNSQSNCPCKAWF IPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFID NDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYEE HDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDALE SASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39586; Mature: 39455
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSV CCCCEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC NGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESE CCCEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKEWQDSPWYAR HHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYAL CCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSV CCCEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC NGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESE CCCEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKEWQDSPWYAR HHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYAL CCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA