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The map label for this gene is rhbD [H]

Identifier: 108812610

GI number: 108812610

Start: 2742171

End: 2742749

Strand: Reverse

Name: rhbD [H]

Synonym: YPN_2449

Alternate gene names: 108812610

Gene position: 2742749-2742171 (Counterclockwise)

Preceding gene: 108812611

Following gene: 108812609

Centisome position: 60.49

GC content: 48.36

Gene sequence:

>579_bases
ATGAACGCTGAGAGGAATATTGAGAGCGATACCGTGGTGAGGAGTGGTGGTTTTCAACTCCGCCCGCTGGTGTTAGCACA
TGATGTCACTTGGCTGACGGATTGGGTTAATCGTGAATATGCTCACTATTGGGGAATGCAAGGCTATAGCCCACAGCAGG
TAAAGGCATTTTACCAAGAATTGAATACGAGCCAGCCTGGCGGTGTCTTTGTGGGCGTTTATCAGCAGCAGCCCGCATTC
TTGTTAGAGCGTTACTTGGCCCAACATGATGTGATTGCCGATTATTACCCTGCACAGCCTGATGATGTTGGAATGCATAT
TTTGGTGGCTCCTCCGGTTGAGAGAATCACGGGTTTTACCTGGCGGGTTTTCCAGGCCATTATGACCTTTATTTTCAGCG
ATCCAACGGTCGCCCGCATCGTAGTTGAGCCTGACGTGCGTAATGAAAAAATCCATCGCTTAAATAAACGAGCGGGTTTT
GTCTATCAACAGCAACTGACATTACCCCATAAAACCGCTTGGTTGGCGTTTTGCACCCGGGAACAATATCGCCTTGCCTT
ACAAAAGGAGCATCAATGA

Upstream 100 bases:

>100_bases
CTTGTCTGATTCGTGAAATAACCGGTACTGAATATTATCCGATTGAGAAAAACATTGCTTTTCAGCAATTCAGTGCGCCA
TCACTGAGGAGGAAAGAGTG

Downstream 100 bases:

>100_bases
TGATGGACTTATCAGCGCCTCTCTCCCCGCACCAGAGTTTGGAACTCCCCCATTTGCAGCCGGTACTGTGGCAAAAAGTG
AATCGCTTGCACTTGTGTAA

Product: siderophore biosynthetic enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNAERNIESDTVVRSGGFQLRPLVLAHDVTWLTDWVNREYAHYWGMQGYSPQQVKAFYQELNTSQPGGVFVGVYQQQPAF
LLERYLAQHDVIADYYPAQPDDVGMHILVAPPVERITGFTWRVFQAIMTFIFSDPTVARIVVEPDVRNEKIHRLNKRAGF
VYQQQLTLPHKTAWLAFCTREQYRLALQKEHQ

Sequences:

>Translated_192_residues
MNAERNIESDTVVRSGGFQLRPLVLAHDVTWLTDWVNREYAHYWGMQGYSPQQVKAFYQELNTSQPGGVFVGVYQQQPAF
LLERYLAQHDVIADYYPAQPDDVGMHILVAPPVERITGFTWRVFQAIMTFIFSDPTVARIVVEPDVRNEKIHRLNKRAGF
VYQQQLTLPHKTAWLAFCTREQYRLALQKEHQ
>Mature_192_residues
MNAERNIESDTVVRSGGFQLRPLVLAHDVTWLTDWVNREYAHYWGMQGYSPQQVKAFYQELNTSQPGGVFVGVYQQQPAF
LLERYLAQHDVIADYYPAQPDDVGMHILVAPPVERITGFTWRVFQAIMTFIFSDPTVARIVVEPDVRNEKIHRLNKRAGF
VYQQQLTLPHKTAWLAFCTREQYRLALQKEHQ

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR019432 [H]

Pfam domain/function: PF10331 AlcB [H]

EC number: NA

Molecular weight: Translated: 22369; Mature: 22369

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAERNIESDTVVRSGGFQLRPLVLAHDVTWLTDWVNREYAHYWGMQGYSPQQVKAFYQE
CCCCCCCCCCEEEECCCCEEEEEEEEHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHH
LNTSQPGGVFVGVYQQQPAFLLERYLAQHDVIADYYPAQPDDVGMHILVAPPVERITGFT
HCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECCCHHHHCCCH
WRVFQAIMTFIFSDPTVARIVVEPDVRNEKIHRLNKRAGFVYQQQLTLPHKTAWLAFCTR
HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
EQYRLALQKEHQ
HHHHHHHHCCCC
>Mature Secondary Structure
MNAERNIESDTVVRSGGFQLRPLVLAHDVTWLTDWVNREYAHYWGMQGYSPQQVKAFYQE
CCCCCCCCCCEEEECCCCEEEEEEEEHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHH
LNTSQPGGVFVGVYQQQPAFLLERYLAQHDVIADYYPAQPDDVGMHILVAPPVERITGFT
HCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECCCHHHHCCCH
WRVFQAIMTFIFSDPTVARIVVEPDVRNEKIHRLNKRAGFVYQQQLTLPHKTAWLAFCTR
HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
EQYRLALQKEHQ
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]