| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812595
Identifier: 108812595
GI number: 108812595
Start: 2724294
End: 2724881
Strand: Reverse
Name: 108812595
Synonym: YPN_2434
Alternate gene names: NA
Gene position: 2724881-2724294 (Counterclockwise)
Preceding gene: 108812600
Following gene: 108812590
Centisome position: 60.09
GC content: 51.87
Gene sequence:
>588_bases ATGAAACTGCACGCCAAAGAAGTTGTCTTTTTCTACTGCGGCGGTAAATGGCTCGCCGTAGTTGGTTTGGGCGATGGTAT TTGGGCATATTGGCATTGCATATCCATGCACGAAGTAGAAATAGGTTCCGTCAGGGATACCACGGAACAGATGGTTACCG GCTTGTGCGGTAATCTGATTCCACCCCATATGCGGCAGCGGCAGACCAAAATCAGTCATCTTTTTTACTGGTGCATCAAT CATCCCGAGGGTGGTGATCCCGCCACTTTCCTCACTGCTGGTTGCCAGCAACTGCATACCAAGGCAGATCCCCAGCACGG GTTGAGTACAACTTTTGATCAGTTCGATAAGCTCGCGTTGCCTCAATTGTTCCATGGCGGCATGGGCGGTGCCCACACCC GGCATAAACAGTTTGTCTGCTCGCAAGACGACTGCCGGGTCGCGGCTGATAACCGGTGTATAACCCAAACGCTGTACCGC ATAGGTGACAGAGGAGAGATTGGCACAACCGGTATCCAGGATCACCACATCCATTACAGCACTCCTTTTGAACTTGGCAG GGTATTGCCTTCAACGCGAATGGCTTGA
Upstream 100 bases:
>100_bases ACCTTGCCTTCGATCAAATCCAAAGCGGGAATAATCATGGTGCTTACATCTCCAGAAAGTTTTTCATCAATTGGGCCCCA GCCGCTCCGGAACGTTCCGG
Downstream 100 bases:
>100_bases CGCAAGGTACGACCAAATACTTTAAACAGGCTTTCTACTCGGTGATGATCGTTGCGACCTTTGGTTTTCAGGTGCAAGGT ACAGGCCATGGCATACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA
Sequences:
>Translated_195_residues MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA >Mature_195_residues MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21862; Mature: 21862
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLI CCCCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCC PPHMRQRQTKISHLFYWCINHPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLAL CHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH PQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYRIGDRGEIGTTGIQDHHIHYS HHHHHCCCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEC TPFELGRVLPSTRMA CHHHHHHHCCCCCCC >Mature Secondary Structure MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLI CCCCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCC PPHMRQRQTKISHLFYWCINHPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLAL CHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH PQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYRIGDRGEIGTTGIQDHHIHYS HHHHHCCCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEC TPFELGRVLPSTRMA CHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA