Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812595

Identifier: 108812595

GI number: 108812595

Start: 2724294

End: 2724881

Strand: Reverse

Name: 108812595

Synonym: YPN_2434

Alternate gene names: NA

Gene position: 2724881-2724294 (Counterclockwise)

Preceding gene: 108812600

Following gene: 108812590

Centisome position: 60.09

GC content: 51.87

Gene sequence:

>588_bases
ATGAAACTGCACGCCAAAGAAGTTGTCTTTTTCTACTGCGGCGGTAAATGGCTCGCCGTAGTTGGTTTGGGCGATGGTAT
TTGGGCATATTGGCATTGCATATCCATGCACGAAGTAGAAATAGGTTCCGTCAGGGATACCACGGAACAGATGGTTACCG
GCTTGTGCGGTAATCTGATTCCACCCCATATGCGGCAGCGGCAGACCAAAATCAGTCATCTTTTTTACTGGTGCATCAAT
CATCCCGAGGGTGGTGATCCCGCCACTTTCCTCACTGCTGGTTGCCAGCAACTGCATACCAAGGCAGATCCCCAGCACGG
GTTGAGTACAACTTTTGATCAGTTCGATAAGCTCGCGTTGCCTCAATTGTTCCATGGCGGCATGGGCGGTGCCCACACCC
GGCATAAACAGTTTGTCTGCTCGCAAGACGACTGCCGGGTCGCGGCTGATAACCGGTGTATAACCCAAACGCTGTACCGC
ATAGGTGACAGAGGAGAGATTGGCACAACCGGTATCCAGGATCACCACATCCATTACAGCACTCCTTTTGAACTTGGCAG
GGTATTGCCTTCAACGCGAATGGCTTGA

Upstream 100 bases:

>100_bases
ACCTTGCCTTCGATCAAATCCAAAGCGGGAATAATCATGGTGCTTACATCTCCAGAAAGTTTTTCATCAATTGGGCCCCA
GCCGCTCCGGAACGTTCCGG

Downstream 100 bases:

>100_bases
CGCAAGGTACGACCAAATACTTTAAACAGGCTTTCTACTCGGTGATGATCGTTGCGACCTTTGGTTTTCAGGTGCAAGGT
ACAGGCCATGGCATACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN
HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR
IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA

Sequences:

>Translated_195_residues
MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN
HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR
IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA
>Mature_195_residues
MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLIPPHMRQRQTKISHLFYWCIN
HPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLALPQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYR
IGDRGEIGTTGIQDHHIHYSTPFELGRVLPSTRMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21862; Mature: 21862

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLI
CCCCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCC
PPHMRQRQTKISHLFYWCINHPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLAL
CHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
PQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYRIGDRGEIGTTGIQDHHIHYS
HHHHHCCCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
TPFELGRVLPSTRMA
CHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLHAKEVVFFYCGGKWLAVVGLGDGIWAYWHCISMHEVEIGSVRDTTEQMVTGLCGNLI
CCCCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHCCCC
PPHMRQRQTKISHLFYWCINHPEGGDPATFLTAGCQQLHTKADPQHGLSTTFDQFDKLAL
CHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
PQLFHGGMGGAHTRHKQFVCSQDDCRVAADNRCITQTLYRIGDRGEIGTTGIQDHHIHYS
HHHHHCCCCCCCCHHHHEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
TPFELGRVLPSTRMA
CHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA