| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is yaiL [H]
Identifier: 108812566
GI number: 108812566
Start: 2687707
End: 2688246
Strand: Reverse
Name: yaiL [H]
Synonym: YPN_2405
Alternate gene names: 108812566
Gene position: 2688246-2687707 (Counterclockwise)
Preceding gene: 108812567
Following gene: 108812561
Centisome position: 59.28
GC content: 41.3
Gene sequence:
>540_bases ATGACAAAACTCACCTTACAAGAGCAGATGCTAAAAGCTGGATTAGTGACCAGCAAAAAAATGGCTAAAGTCCAAAGAAC GGCTAAAAAATCACGAGCTCAGACTCGTGAGGCAAGAGAGGCTGTGGAGGAAAATAAAAAAGCACAACTTGAGCGTGATA AACAGCTAAGCGAACAACAAAAACAGGCGGCTTTATCTAAAGAGTATAAAGCTCAGGTTAAACAGCTCATTGAAATGAAC AAAATCGATATTTCAAAAGGCAATATTGGTTTTAACTTCACAGATAATAATTTAATTAAAAAAATAGTTGTGGATAAGCT TACTCAAGCTCAGCTGATTAGTGGCCGTCTCGCCATTGCCCGTTTGGTTGTTGATAACAGCGGCGAGAGTGAATACGCAA TTATCCCCGCGAGCGTGGCCGACAAAATTGCGCAGCGAGATGCGAGCAGTATTGTATTAAATAGCGCGCTTAGTCAGGAA GAGCAAGATGGCGAAGATCCGTATGCCGATTTTAAAGTGCCTGATGATTTGATGTGGTAA
Upstream 100 bases:
>100_bases GTAAGGCCTAAATTCAGAGGGAGACTACACGGTAACCTGATACAGCCTAAAAAATTACAGGTATAATCCCACCAATTATC CAACTGGTTTAGAAACGAAG
Downstream 100 bases:
>100_bases TTAACATTTTGTAGAGGCTTATGTTGGCAAATAATAATCTTTACAAATACTAATCTTTACAAATACTCATAGATGAAAAG TCCCTCAGGGCTTTTCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTKLTLQEQMLKAGLVTSKKMAKVQRTAKKSRAQTREAREAVEENKKAQLERDKQLSEQQKQAALSKEYKAQVKQLIEMN KIDISKGNIGFNFTDNNLIKKIVVDKLTQAQLISGRLAIARLVVDNSGESEYAIIPASVADKIAQRDASSIVLNSALSQE EQDGEDPYADFKVPDDLMW
Sequences:
>Translated_179_residues MTKLTLQEQMLKAGLVTSKKMAKVQRTAKKSRAQTREAREAVEENKKAQLERDKQLSEQQKQAALSKEYKAQVKQLIEMN KIDISKGNIGFNFTDNNLIKKIVVDKLTQAQLISGRLAIARLVVDNSGESEYAIIPASVADKIAQRDASSIVLNSALSQE EQDGEDPYADFKVPDDLMW >Mature_178_residues TKLTLQEQMLKAGLVTSKKMAKVQRTAKKSRAQTREAREAVEENKKAQLERDKQLSEQQKQAALSKEYKAQVKQLIEMNK IDISKGNIGFNFTDNNLIKKIVVDKLTQAQLISGRLAIARLVVDNSGESEYAIIPASVADKIAQRDASSIVLNSALSQEE QDGEDPYADFKVPDDLMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=179, Percent_Identity=86.5921787709497, Blast_Score=311, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 20038; Mature: 19907
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTLQEQMLKAGLVTSKKMAKVQRTAKKSRAQTREAREAVEENKKAQLERDKQLSEQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAALSKEYKAQVKQLIEMNKIDISKGNIGFNFTDNNLIKKIVVDKLTQAQLISGRLAIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH RLVVDNSGESEYAIIPASVADKIAQRDASSIVLNSALSQEEQDGEDPYADFKVPDDLMW HHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TKLTLQEQMLKAGLVTSKKMAKVQRTAKKSRAQTREAREAVEENKKAQLERDKQLSEQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAALSKEYKAQVKQLIEMNKIDISKGNIGFNFTDNNLIKKIVVDKLTQAQLISGRLAIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH RLVVDNSGESEYAIIPASVADKIAQRDASSIVLNSALSQEEQDGEDPYADFKVPDDLMW HHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]