| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812146
Identifier: 108812146
GI number: 108812146
Start: 2245332
End: 2245505
Strand: Reverse
Name: 108812146
Synonym: YPN_1984
Alternate gene names: NA
Gene position: 2245505-2245332 (Counterclockwise)
Preceding gene: 108812147
Following gene: 108812144
Centisome position: 49.52
GC content: 53.45
Gene sequence:
>174_bases ATGGCCAACCTGTTTTATAGCGCGGTGCTTGAAGGGGGTACCGCACCAGATACCGTTTTGCCAACTATCGGGCAAGCGCG CTTCGGTGGCTTACGCCATTGGTACCTTAAATCTACGGCCCCAACGGCAGGTTTCCCCTTCATCTGCATTTATTTATCCG CAGCCAGAGGTTAG
Upstream 100 bases:
>100_bases CTTGCATCGGATTATGGAACAACGGCAGCAGCGGTCAGTATGACCGTCGTGATTTATCGTCTTTGGCCTCATATTCTGGT TGTGCCAGCGCCAACAGAAG
Downstream 100 bases:
>100_bases CGGTCCTTTTTTTTACCAAAAATTTTCAGCAGCGCGCCAATCACACAACCCAAAACGACACCCAGTATTACCCATTCAGT AAATGACATAATCAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MANLFYSAVLEGGTAPDTVLPTIGQARFGGLRHWYLKSTAPTAGFPFICIYLSAARG
Sequences:
>Translated_57_residues MANLFYSAVLEGGTAPDTVLPTIGQARFGGLRHWYLKSTAPTAGFPFICIYLSAARG >Mature_56_residues ANLFYSAVLEGGTAPDTVLPTIGQARFGGLRHWYLKSTAPTAGFPFICIYLSAARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6077; Mature: 5946
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLFYSAVLEGGTAPDTVLPTIGQARFGGLRHWYLKSTAPTAGFPFICIYLSAARG CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure ANLFYSAVLEGGTAPDTVLPTIGQARFGGLRHWYLKSTAPTAGFPFICIYLSAARG CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA