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The map label for this gene is yheO [C]

Identifier: 108812121

GI number: 108812121

Start: 2216444

End: 2217109

Strand: Reverse

Name: yheO [C]

Synonym: YPN_1959

Alternate gene names: 108812121

Gene position: 2217109-2216444 (Counterclockwise)

Preceding gene: 108812125

Following gene: 108812120

Centisome position: 48.89

GC content: 37.09

Gene sequence:

>666_bases
ATGAGAGATATATTAAATAAAGCATTTACTGATGATGATCGGAGATTATTACAGTCTTATATTCCCTTCATAGAGTGCTT
GGGACAGTTTTTTGGTGAGTACTGTGAAATTGTACTGCACAGTTTTGAAGATCTTCATCGTTCCGTGATCCACATTGTGA
ATGGGCATGTTACTGGCAGAGAGTTAGGTGCGCCGGTCACCAATATAGCCTTGGAAAAACTGACAGAATTCAAATCATCA
AAAGAGATGTGGGATGTTTATTTCAGCAATAAAGATACGCGTCCTTTTAAGTCTTCATCCACTCTGATAGTTAACAAACA
GGGCGATCCAATAGGAATGATATGCATGAATATGGCGATGGATATGCCAATGAATGCTTTTATCGATATATTCATGAAAG
CCAATAATAGTTGTAGAAATGAGAGTTTTACACAGGATGTCAATAACCTGGTCCAAAGCCACCTTGAACCGGTTAAGAGT
ATGGTTTATGCGAATAAAGACATCCCTAGTAAGAACAAAAATTTCGAAATAATCAAAGAATTAAATGAAACGGGTTTATT
TGAACTCCCCGTAACAAATAAAATTGTCTCCGCAAGTCTGGGGATTAGTCCGGTGACCATTTATAAACATTTAAGAACGC
TAAATGCACAAAAAGTCAGTGAGTGA

Upstream 100 bases:

>100_bases
TAAATATATTTTACTAAGTGTACTGTTTAGATACTGTATTGGACAGAGGGCAGCGAGAGGTGTAGCATGATACACACGAC
AATTTTTCTTGGGTAACATC

Downstream 100 bases:

>100_bases
GGTCCTCGACTTTGGCTATGATAGTGCCTTCCCTGATGTTCGGTTGGCCGAATAGTATCGCCATAAATTTTATGGCGAAG
TAACATTAATATGGAGAAGT

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRDILNKAFTDDDRRLLQSYIPFIECLGQFFGEYCEIVLHSFEDLHRSVIHIVNGHVTGRELGAPVTNIALEKLTEFKSS
KEMWDVYFSNKDTRPFKSSSTLIVNKQGDPIGMICMNMAMDMPMNAFIDIFMKANNSCRNESFTQDVNNLVQSHLEPVKS
MVYANKDIPSKNKNFEIIKELNETGLFELPVTNKIVSASLGISPVTIYKHLRTLNAQKVSE

Sequences:

>Translated_221_residues
MRDILNKAFTDDDRRLLQSYIPFIECLGQFFGEYCEIVLHSFEDLHRSVIHIVNGHVTGRELGAPVTNIALEKLTEFKSS
KEMWDVYFSNKDTRPFKSSSTLIVNKQGDPIGMICMNMAMDMPMNAFIDIFMKANNSCRNESFTQDVNNLVQSHLEPVKS
MVYANKDIPSKNKNFEIIKELNETGLFELPVTNKIVSASLGISPVTIYKHLRTLNAQKVSE
>Mature_221_residues
MRDILNKAFTDDDRRLLQSYIPFIECLGQFFGEYCEIVLHSFEDLHRSVIHIVNGHVTGRELGAPVTNIALEKLTEFKSS
KEMWDVYFSNKDTRPFKSSSTLIVNKQGDPIGMICMNMAMDMPMNAFIDIFMKANNSCRNESFTQDVNNLVQSHLEPVKS
MVYANKDIPSKNKNFEIIKELNETGLFELPVTNKIVSASLGISPVTIYKHLRTLNAQKVSE

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yheO [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=215, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 25189; Mature: 25189

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDILNKAFTDDDRRLLQSYIPFIECLGQFFGEYCEIVLHSFEDLHRSVIHIVNGHVTGR
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELGAPVTNIALEKLTEFKSSKEMWDVYFSNKDTRPFKSSSTLIVNKQGDPIGMICMNMAM
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
DMPMNAFIDIFMKANNSCRNESFTQDVNNLVQSHLEPVKSMVYANKDIPSKNKNFEIIKE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LNETGLFELPVTNKIVSASLGISPVTIYKHLRTLNAQKVSE
HHHCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDILNKAFTDDDRRLLQSYIPFIECLGQFFGEYCEIVLHSFEDLHRSVIHIVNGHVTGR
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELGAPVTNIALEKLTEFKSSKEMWDVYFSNKDTRPFKSSSTLIVNKQGDPIGMICMNMAM
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
DMPMNAFIDIFMKANNSCRNESFTQDVNNLVQSHLEPVKSMVYANKDIPSKNKNFEIIKE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LNETGLFELPVTNKIVSASLGISPVTIYKHLRTLNAQKVSE
HHHCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]