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The map label for this gene is tas [H]

Identifier: 108812116

GI number: 108812116

Start: 2204281

End: 2205891

Strand: Reverse

Name: tas [H]

Synonym: YPN_1954

Alternate gene names: 108812116

Gene position: 2205891-2204281 (Counterclockwise)

Preceding gene: 108812117

Following gene: 108812115

Centisome position: 48.65

GC content: 50.9

Gene sequence:

>1611_bases
ATGTTTGGTCAAATCCGGATTTCTACCAGTTTTTTCCTGCTGCTGATGTTTCTTTGCGCCATACAGTTAATTTCAAGTGG
TCTATCATTTACGGCTTTTCGCTCAGACTACCAAAATTTAAATCGAGTGGAGTTAAGTAGTCAGCAACGCGATGCATTAA
GCCTCAGTTGGGTATCTTTGCTTCAGGCACGTAATACCTTAAACCGTGCGGCTACTCGCTCGGCGCTCAATGTTCCTCAG
GAGCAAGTTAACGCTTTAATGGGGAGTGCGCGCAGTGCATTGCAGAAAGCTGAACTTTACTTTAATCAGTTTCAGGCGGT
ACCGCGCCTTGATGAGAGTGAGAGCAGTGGGCAATTACTGGATGCGACCAAAAACAGTTATCAAAACCTTCGTAGCGCAT
TACGTGAGTTAATTGATTTTCTGGAAGCGGGTGATTTACAAGCATTTATGGATCAACCCACTCAGAAAACGCAAGATTTG
TTTGAAGCGGATTTCATCCAGTATTTGCAATACGCCAATGAGGTTATTGCCGATGCCGGTCAGCAGAATCAGCAGGCTTA
TCAGCTCTCAATCTGGATATTTAGTGGTGCGATTCTGATGGTTATCACGATGGCCATTTCGTCGTTGATCTGGTTGCGCA
ACATGTTTGTTCGGCCATTAGCGACGATGCGTGAGCATTTTGGCCGCATTGCTCAAGGGGATTTGTCTGGGCAGATCTCG
GTGACTGGCCGTAATGAAATCAGCCAGATGTTCGCCAGCTTACGCACCATGCAGCAGTCGCTGATCTCAACGGTCAGCAA
TGTGCGTGAGGGTACCGAATCGATGTTGACCGGTATCCAGGAAATTTCCGCAGGTAACAACGATTTATCGGCAAGAACTG
AACAGCAAGCGGCTTCCTTGGAACAAACTGCCGCGAGTATGGAACAACTGACCGCCACGGTAAAACAGAATGCGGACAAT
GCGCATCAGGCCACGGTACTGGCGCAAGAGGCTTCCGGTACGGCAGCTAAAGGCGGAGAACTGACGGCGAGTGTCGTCAC
CACCATGCATGCAATCGCTACCAGTTCGCAGAAGATTGGTGCGATCACCAGCGTTATCGACGGTATTGCCTTCCAAACCA
ATATTTTGGCACTGAATGCGGCCGTGGAGGCGGCCCGTGCGGGTGAGCAAGGGCGTGGTTTTGCGGTGGTTGCGGGTGAA
GTCCGTAATTTAGCACAACGCAGTGCGCAAGCGGCCAAAGAGATCAAAGGGCTGATTGATGAGTCCGTCAGCCGTGTCCG
CCAGGGGTCTACGCTGGTCGAAAGTGCAGGAACTACCATGGAAGAGATCGTCCGCTCGGTGGCGCGTGTGACTGACATTA
TGGGGGAGATCGAATCTGCTTCGGATGAACAGAGCCGGGGTATTGAACAAATATCACTCGCCGTAACGCAAATGGATCAG
GTTACTCAGCAAAATGCGTCATTAGTGGAAGAGGCCGCGGCGGCAGCCAATGCACTGGAAGAGCAGGCCAGCATGCTCTC
CGATGCCGTCTCTGTTTTCCGTTTGGGGCAGGGGCACGACGAACAGTCAGTTGCGGGCAATAGCCAGCAATCATTGGCCA
CGCATTATTAG

Upstream 100 bases:

>100_bases
ATCCGCCTGCTGGCCATTTACCTGCCACGCCAATTGATTTGGGTGTATGCAAAATAATATTAATAAAGTCGGCCTATGAG
CCGGCTGAGAAGAGGTTACG

Downstream 100 bases:

>100_bases
TCGCTCATTATGGGTCGATCAGCATGAGTGGTTCCGACCAGGAGTGACAATCGATCATCACTCGTAACGGGTCATCACGA
GTAACGACAAGTGGCTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLRTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASMLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY

Sequences:

>Translated_536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLRTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASMLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
>Mature_536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLRTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASMLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=518, Percent_Identity=56.5637065637066, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI2367378, Length=529, Percent_Identity=54.0642722117202, Blast_Score=473, Evalue=1e-134,
Organism=Escherichia coli, GI1788195, Length=518, Percent_Identity=51.5444015444015, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1787690, Length=431, Percent_Identity=50.3480278422274, Blast_Score=367, Evalue=1e-103,
Organism=Escherichia coli, GI1789453, Length=338, Percent_Identity=41.1242603550296, Blast_Score=227, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57950; Mature: 57950

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSL
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHH
LQARNTLNRAATRSALNVPQEQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDLFEADFIQYLQYANEVIADAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEE
VTGRNEISQMFASLRTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASL
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EQTAASMEQLTATVKQNADNAHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
AITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
ESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
VTQQNASLVEEAAAAANALEEQASMLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCC
>Mature Secondary Structure
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSL
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHH
LQARNTLNRAATRSALNVPQEQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDLFEADFIQYLQYANEVIADAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEE
VTGRNEISQMFASLRTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASL
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EQTAASMEQLTATVKQNADNAHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
AITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
ESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
VTQQNASLVEEAAAAANALEEQASMLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]