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The map label for this gene is 108812108

Identifier: 108812108

GI number: 108812108

Start: 2196719

End: 2197237

Strand: Reverse

Name: 108812108

Synonym: YPN_1946

Alternate gene names: NA

Gene position: 2197237-2196719 (Counterclockwise)

Preceding gene: 108812109

Following gene: 108812107

Centisome position: 48.46

GC content: 57.03

Gene sequence:

>519_bases
GTGGCGTCTGGCAGCCACAGTACCGCGATGGGTACGGGCAGCAAGGCGACGGCGGCAAACAGCACCGCGCTGGGGGCCAA
CTCAGTGGCGGATCGTGAAAACAGTGTCTCGGTGGGGTCAGTGGGTAATGAACGGCAGCTCACTAATATTGCTGTGGGGA
CTCAGGGCACTGATGCGGTGAATCTGGATCAACTCAACCATAGCATGTCGAATGTCACCAACGACGCCAATGCTTATACA
GACCAGCGCTATTCTGCACTTAAAGAAGATCTGAAAAAACAGGATAGTACGTTAAGTGCGGGGATCGCCGGTGCCATGGC
GATGGCGAGCCTGACTCAACCCTATACGCCGGGTGCCAGCATGGCGACCATTGGTGCGGCCAGCTATCGGGGCCAGTCGG
CGCTGTCGGTGGGGGTGTCGAGTATTTCTGACAGTGGGCGATGGGTCAGCAAATTGCAGGCCTCCTCTAATACACAAGGC
GATATGGGGGTTGGTGTCGGCGTCGGTTATCAATGGTAA

Upstream 100 bases:

>100_bases
AGAACGGCACTGACGGGATGTTCCAGGTGAACAACAACAGCGGTCAGGCCAAGCCTTCGGTCACCGGAACTGATGCGATG
GCGGGGGGGGGGCAGGCTCC

Downstream 100 bases:

>100_bases
AGAAAGGCCAACACTGAATATTGTTTAATAATCATTAACGGGTTGTGCGATTTTTTGCACAGCCCGATTCTACTTCTTAG
GGATTAAAAGGCAGCACCCA

Product: surface protein

Products: NA

Alternate protein names: Autotransporter Adhesin; YadA Domain Protein; Outer Membrane Protein; Adhesin; Haemagglutinin-Related Autotransporter Protein; Surface Protein; Hemagglutinin Family Protein; Haemagglutinin Family Protein; Haemagluttinin Domain Protein; Haemagglutinin; Haemagluttinin Family Protein; YadA-Like Protein; Hep_Hag Family Protein; Surface Fibril Protein; Autotransporter; Peptide Transport System Permease SapB; Surface-Exposed Protein; Cell Surface Protein; Hep_Hag Family; YadA-Like C-Terminal Domain-Containing; Hemagglutinin Domain-Containing Protein; YadA C-Terminal Domain Protein; Surface-Exposed Adhesin Protein; YadA-Like Haemagluttinin; Haemagglutinin/Invasin; YadA/Haemagluttinin Like Protein; Adhesin XadA; Pe-Pgrs Family Protein; Membrane-Anchored Cell Surface Protein Haemagluttinin; Hemaglutinin/Autotransporter Like Protein; Hemagglutinin; Exported Adhesin; Haemagglutinin-Like Protein; Hemagluttinin Like Protein; Repetitive Surface Protein; Triple Helix Repeat-Containing Collagen; Intracellular Motility Protein A; Haemagglutinin Adhesin; Hemagglutinin-Related Protein; Xanthomonas Adhesin Protein; Hemagluttinin Motif-Containing Protein; Hemagluttinin Domain-Containing Protein; Autotransporter/Adhesin; Hemagluttinin Family Protein; Hemagluttinin/Autotransporter Adhesin; Outer Membrane Protein Autotransporter And Adhesin; AT Family Autotransporter/Adhesin; Hsf-Like Protein; Inner Membrane Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MASGSHSTAMGTGSKATAANSTALGANSVADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYT
DQRYSALKEDLKKQDSTLSAGIAGAMAMASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQG
DMGVGVGVGYQW

Sequences:

>Translated_172_residues
MASGSHSTAMGTGSKATAANSTALGANSVADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYT
DQRYSALKEDLKKQDSTLSAGIAGAMAMASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQG
DMGVGVGVGYQW
>Mature_171_residues
ASGSHSTAMGTGSKATAANSTALGANSVADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTD
QRYSALKEDLKKQDSTLSAGIAGAMAMASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGD
MGVGVGVGYQW

Specific function: Unknown

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17374; Mature: 17243

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGSHSTAMGTGSKATAANSTALGANSVADRENSVSVGSVGNERQLTNIAVGTQGTDAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCC
NLDQLNHSMSNVTNDANAYTDQRYSALKEDLKKQDSTLSAGIAGAMAMASLTQPYTPGAS
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
MATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGDMGVGVGVGYQW
HHHHCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASGSHSTAMGTGSKATAANSTALGANSVADRENSVSVGSVGNERQLTNIAVGTQGTDAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCC
NLDQLNHSMSNVTNDANAYTDQRYSALKEDLKKQDSTLSAGIAGAMAMASLTQPYTPGAS
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
MATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGDMGVGVGVGYQW
HHHHCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA