| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812099
Identifier: 108812099
GI number: 108812099
Start: 2187212
End: 2187601
Strand: Reverse
Name: 108812099
Synonym: YPN_1937
Alternate gene names: NA
Gene position: 2187601-2187212 (Counterclockwise)
Preceding gene: 108812103
Following gene: 108812089
Centisome position: 48.24
GC content: 47.95
Gene sequence:
>390_bases ATGGCTACACTCCCACAGAAATATGAAGACGTTGAACGTTGGGCATTTGGTGATACTGAGCAGGTTGCGGATGAGTTATT GGCATTGGTACTGAATGGCACCAAAACGGCGACCTGTGCAGCATTGGATGACGAGGGGGTTCCTCAGGCGGGTGACATAT TTGTCGTGGTTAATGGCCGGAATCAGCCAGCATGTGCGGTAGAGTTAACCGAGGTGGAACTGAAAACGTTTGATCAAGTT GATGAGGCGCATGCACTGGCGGAAGGTGAAGGCGATAGTACACTGGCTTACTGGCGTAAAACTCAACAACGCTTTTTCGA GGAGTATGATATGTTCTCCCCAGATATGATGCTGATCTGTATGAAGTTTAAAGTACTGGAAACCTTCTGA
Upstream 100 bases:
>100_bases GGAAATTTATGCTGATGCGAGAGTTAGTCAGTTCGTGCTGATTAATATAAAGTGTAATATGCGCTGCATCAATAATATTA CGAATAGGAATAATTAGATT
Downstream 100 bases:
>100_bases TGCTGTATCAGGCCGTTGTTTTAGTCCGTTAGCTTCGCCACGTTCCAAGAGAAGAAACCGTCACTCATAAGCATGAACTA TGGGTTGACGGATCTTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF
Sequences:
>Translated_129_residues MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF >Mature_128_residues ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQVD EAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14509; Mature: 14378
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MKFKVLETF HHHHHHHCC >Mature Secondary Structure ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MKFKVLETF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA