Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812099

Identifier: 108812099

GI number: 108812099

Start: 2187212

End: 2187601

Strand: Reverse

Name: 108812099

Synonym: YPN_1937

Alternate gene names: NA

Gene position: 2187601-2187212 (Counterclockwise)

Preceding gene: 108812103

Following gene: 108812089

Centisome position: 48.24

GC content: 47.95

Gene sequence:

>390_bases
ATGGCTACACTCCCACAGAAATATGAAGACGTTGAACGTTGGGCATTTGGTGATACTGAGCAGGTTGCGGATGAGTTATT
GGCATTGGTACTGAATGGCACCAAAACGGCGACCTGTGCAGCATTGGATGACGAGGGGGTTCCTCAGGCGGGTGACATAT
TTGTCGTGGTTAATGGCCGGAATCAGCCAGCATGTGCGGTAGAGTTAACCGAGGTGGAACTGAAAACGTTTGATCAAGTT
GATGAGGCGCATGCACTGGCGGAAGGTGAAGGCGATAGTACACTGGCTTACTGGCGTAAAACTCAACAACGCTTTTTCGA
GGAGTATGATATGTTCTCCCCAGATATGATGCTGATCTGTATGAAGTTTAAAGTACTGGAAACCTTCTGA

Upstream 100 bases:

>100_bases
GGAAATTTATGCTGATGCGAGAGTTAGTCAGTTCGTGCTGATTAATATAAAGTGTAATATGCGCTGCATCAATAATATTA
CGAATAGGAATAATTAGATT

Downstream 100 bases:

>100_bases
TGCTGTATCAGGCCGTTGTTTTAGTCCGTTAGCTTCGCCACGTTCCAAGAGAAGAAACCGTCACTCATAAGCATGAACTA
TGGGTTGACGGATCTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV
DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF

Sequences:

>Translated_129_residues
MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV
DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF
>Mature_128_residues
ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQVD
EAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF

Specific function: Unknown

COG id: COG4405

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14509; Mature: 14378

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC
NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC
CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
MKFKVLETF
HHHHHHHCC
>Mature Secondary Structure 
ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC
NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC
CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
MKFKVLETF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA