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The map label for this gene is proQ

Identifier: 108812088

GI number: 108812088

Start: 2174490

End: 2175203

Strand: Reverse

Name: proQ

Synonym: YPN_1926

Alternate gene names: 108812088

Gene position: 2175203-2174490 (Counterclockwise)

Preceding gene: 108812089

Following gene: 108812087

Centisome position: 47.97

GC content: 52.8

Gene sequence:

>714_bases
ATGGAAAATCAACCTAAGTTGAACAGTAGCAAAGAAGTCATAGCCTTTTTGGCCGAGCGGTTCCCGCTTTGTTTCACCGC
CGAAGGCGAAGCACGCCCTCTTAAGATCGGTATTTTTCAGGATCTGGTAGAACGTGTTCAGGGGGAAGAGAATTTAAGCA
AAACGCAATTGCGTTCTGCGCTGCGTCTCTACACCTCAAGCTGGCGTTATCTTTATGGGGTCAAAGTCGGTGCTGAGCGT
GTTGATTTGGATGGCAACCCTTGTGGTGTGCTGGAAGAACAACATGTAGAACATGCCCGCAAACAGCTGGAAGAAGCGAA
AGCCCGTGTTCAGGCACAACGAGCTGAACAACAGGCTAAAAAGCGCGAAGCTGCCATTGCTGCGGGTGAAACGCCAGAGC
CACGTCGCCCACGTCCGGCAGGTAAAAAACCTGCACCGCGTCGTGAAGCGGGTGCGGCTCCGGAAAACCGCAAGCCTCGT
CAGTCACCTCGCCCGCAACAGGTTCGGCCACCTCGTCCACAGGTTGAGGAAAACCAGCCACGTCCTGTGCCGGTCACAGA
TATCTCTAAACTGCAAATTGGTCAAGAAATCAAAGTCAGAGCAGGCAAGAGTGCAATGGATGCAACCGTATTGGAAATCG
CTAAAGATGGCGTACGGGTGCAGCTATCTTCCGGTCTGGCGATGATTGTGCGCGCAGAACACTTGCAGTTCTGA

Upstream 100 bases:

>100_bases
GTTGATATACGGATAACGTGGCAATTGCTGATGGCGTCATTATAATGACGCCTGTTCATGCCTGCGCTGGTTGGCAAACC
CGTTGTAATCAGGAAATTTC

Downstream 100 bases:

>100_bases
TACGGAGGCCAACCTAGGCATGAACAAATTTGTCAGACTAGCAGCAATCGCAGGCTTGTTACTGGCTGGGGCGAGTTACG
CAACCGATACAACGTATCGA

Product: putative solute/DNA competence effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MENQPKLNSSKEVIAFLAERFPLCFTAEGEARPLKIGIFQDLVERVQGEENLSKTQLRSALRLYTSSWRYLYGVKVGAER
VDLDGNPCGVLEEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPR
QSPRPQQVRPPRPQVEENQPRPVPVTDISKLQIGQEIKVRAGKSAMDATVLEIAKDGVRVQLSSGLAMIVRAEHLQF

Sequences:

>Translated_237_residues
MENQPKLNSSKEVIAFLAERFPLCFTAEGEARPLKIGIFQDLVERVQGEENLSKTQLRSALRLYTSSWRYLYGVKVGAER
VDLDGNPCGVLEEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPR
QSPRPQQVRPPRPQVEENQPRPVPVTDISKLQIGQEIKVRAGKSAMDATVLEIAKDGVRVQLSSGLAMIVRAEHLQF
>Mature_237_residues
MENQPKLNSSKEVIAFLAERFPLCFTAEGEARPLKIGIFQDLVERVQGEENLSKTQLRSALRLYTSSWRYLYGVKVGAER
VDLDGNPCGVLEEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPR
QSPRPQQVRPPRPQVEENQPRPVPVTDISKLQIGQEIKVRAGKSAMDATVLEIAKDGVRVQLSSGLAMIVRAEHLQF

Specific function: Not exactly known; may be a structural element that influences the osmotic activation of proP at a post-translational level

COG id: COG3109

COG function: function code T; Activator of osmoprotectant transporter ProP

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proQ family

Homologues:

Organism=Escherichia coli, GI48994892, Length=245, Percent_Identity=73.8775510204082, Blast_Score=331, Evalue=3e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PROQ_YERP3 (A7FHC0)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001400648.1
- ProteinModelPortal:   A7FHC0
- SMR:   A7FHC0
- STRING:   A7FHC0
- GeneID:   5387374
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_1671
- eggNOG:   COG3109
- HOGENOM:   HBG495470
- OMA:   RFPQCFS
- ProtClustDB:   PRK04950
- BioCyc:   YPSE349747:YPSIP31758_1671-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00749
- InterPro:   IPR016103
- Gene3D:   G3DSA:1.10.1710.10
- SMART:   SM00945

Pfam domain/function: PF04352 ProQ; SSF48657 FINO

EC number: NA

Molecular weight: Translated: 26499; Mature: 26499

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQPKLNSSKEVIAFLAERFPLCFTAEGEARPLKIGIFQDLVERVQGEENLSKTQLRSA
CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHH
LRLYTSSWRYLYGVKVGAERVDLDGNPCGVLEEQHVEHARKQLEEAKARVQAQRAEQQAK
HHHHHHCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPRQSPRPQQVRPPRPQVEENQP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPVPVTDISKLQIGQEIKVRAGKSAMDATVLEIAKDGVRVQLSSGLAMIVRAEHLQF
CCCCCCCHHHHHCCCHHEEECCCHHHHHHHHHHHHCCEEEEECCCEEEEEEHHHHCC
>Mature Secondary Structure
MENQPKLNSSKEVIAFLAERFPLCFTAEGEARPLKIGIFQDLVERVQGEENLSKTQLRSA
CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHH
LRLYTSSWRYLYGVKVGAERVDLDGNPCGVLEEQHVEHARKQLEEAKARVQAQRAEQQAK
HHHHHHCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPRQSPRPQQVRPPRPQVEENQP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPVPVTDISKLQIGQEIKVRAGKSAMDATVLEIAKDGVRVQLSSGLAMIVRAEHLQF
CCCCCCCHHHHHCCCHHEEECCCHHHHHHHHHHHHCCEEEEECCCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA