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The map label for this gene is mliC [H]

Identifier: 108811990

GI number: 108811990

Start: 2064208

End: 2064525

Strand: Reverse

Name: mliC [H]

Synonym: YPN_1828

Alternate gene names: 108811990

Gene position: 2064525-2064208 (Counterclockwise)

Preceding gene: 108811991

Following gene: 162139439

Centisome position: 45.53

GC content: 42.77

Gene sequence:

>318_bases
ATGATGAAATATCTATTTGCAGCAACAGTACCGTTGCTGTTGGCAGGGTGCAGTTTGCTTCAATCGATGAATGGCACGTC
GGTGAATGAAACGCTACATTATCAGTGTGGTACCACAAAACTGACGGTGACTCAGAACAATAAGCAGGATAACGTTAGTT
TCATCATGGATGGCAAACAATTAACGCTACCACAAGTCCGTGCTGCATCAGGGGCCAAATACAGTGATGGTCATTATACT
TTCTGGTCGAAGGGTGATAGCGCATTTATTGAGCGCGAGGAGAAAGTCATCATTAATGATTGTGTTTTGATCAAGTAA

Upstream 100 bases:

>100_bases
CCGCGAGACCATTTTAGGAGCAGTCCATCCTGTATCATCATGGTGACGGTGATAAGCTACCTTAGATCTTACGGTAGCTT
ACCTAATCACACAGGACGAG

Downstream 100 bases:

>100_bases
TCTCGTCGTCGTAGGCTCTGGATGATTGTGATTCTGTGGCGGCGAGGGCAGAATGATAACCACAGCTTTCCTGCGCGTTA
CAGAGTTTATATGACTGAGA

Product: lipoprotein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MMKYLFAATVPLLLAGCSLLQSMNGTSVNETLHYQCGTTKLTVTQNNKQDNVSFIMDGKQLTLPQVRAASGAKYSDGHYT
FWSKGDSAFIEREEKVIINDCVLIK

Sequences:

>Translated_105_residues
MMKYLFAATVPLLLAGCSLLQSMNGTSVNETLHYQCGTTKLTVTQNNKQDNVSFIMDGKQLTLPQVRAASGAKYSDGHYT
FWSKGDSAFIEREEKVIINDCVLIK
>Mature_105_residues
MMKYLFAATVPLLLAGCSLLQSMNGTSVNETLHYQCGTTKLTVTQNNKQDNVSFIMDGKQLTLPQVRAASGAKYSDGHYT
FWSKGDSAFIEREEKVIINDCVLIK

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081949, Length=89, Percent_Identity=42.6966292134831, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 11640; Mature: 11640

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYLFAATVPLLLAGCSLLQSMNGTSVNETLHYQCGTTKLTVTQNNKQDNVSFIMDGKQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCE
LTLPQVRAASGAKYSDGHYTFWSKGDSAFIEREEKVIINDCVLIK
ECCCCEECCCCCEECCCCEEEECCCCCCEEECCCEEEEEEEEEEC
>Mature Secondary Structure
MMKYLFAATVPLLLAGCSLLQSMNGTSVNETLHYQCGTTKLTVTQNNKQDNVSFIMDGKQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCE
LTLPQVRAASGAKYSDGHYTFWSKGDSAFIEREEKVIINDCVLIK
ECCCCEECCCCCEECCCCEEEECCCCCCEEECCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA