Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 108811939

GI number: 108811939

Start: 2007242

End: 2007715

Strand: Reverse

Name: yceJ [H]

Synonym: YPN_1777

Alternate gene names: 108811939

Gene position: 2007715-2007242 (Counterclockwise)

Preceding gene: 108811942

Following gene: 108811938

Centisome position: 44.28

GC content: 44.94

Gene sequence:

>474_bases
ATGCTTTTAAAAAATACGAGGGAGCAGTTTGGATATATCACTATTGCTATCCACTGGTTGGTTGCATTAACGGTATATGC
ACTGTTTGCTCTGGGGCTATGGATGGTGACCTTGGGCTACTACGATGGTTGGTATCACCAGGCACCAGAAATACATAAAA
GCGTGGGGTGCATCCTTTTTGCTGTGATGCTATTTAGGGTGATCTGGCGCTTTATCTCACCGCCACCTAAGCCTTTATCG
AGCTATAACCGCTTGACCCGGGTCAGTGCTGTCTTGGCCCATTTAATGTTATATAGCATTCTGTTTTGTCTCATGCTTAG
TGGTTATTTAATCTCTACTGCAGACGGACAACCTATTAATGTATTCGGCTGGTTCGCTATACCCGTAACGTTGGCCGGGT
TACCTGATCAGGCTGATACCGCTGGCACTATACATCTCTATTTAGCGTGGGCTGTGGTAGTGCTTATATTTTAA

Upstream 100 bases:

>100_bases
GACAGCAATTAGAGGAATATATCTTATATAAAATAAATGTTGATTTTATGTTTAATAATGTTTGAATGTTGTTTTATGAA
TCAAGCAAAAGGGAATCTCT

Downstream 100 bases:

>100_bases
CCCCTGTGGTGATTAGCTATCGCCACACTGAAACAGAGAGAGTTTCATCAAAACGCCGCTAAGGGAAAACCTTGAGTCGT
AGAAAACCCTCTCTGTTTCA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLLKNTREQFGYITIAIHWLVALTVYALFALGLWMVTLGYYDGWYHQAPEIHKSVGCILFAVMLFRVIWRFISPPPKPLS
SYNRLTRVSAVLAHLMLYSILFCLMLSGYLISTADGQPINVFGWFAIPVTLAGLPDQADTAGTIHLYLAWAVVVLIF

Sequences:

>Translated_157_residues
MLLKNTREQFGYITIAIHWLVALTVYALFALGLWMVTLGYYDGWYHQAPEIHKSVGCILFAVMLFRVIWRFISPPPKPLS
SYNRLTRVSAVLAHLMLYSILFCLMLSGYLISTADGQPINVFGWFAIPVTLAGLPDQADTAGTIHLYLAWAVVVLIF
>Mature_157_residues
MLLKNTREQFGYITIAIHWLVALTVYALFALGLWMVTLGYYDGWYHQAPEIHKSVGCILFAVMLFRVIWRFISPPPKPLS
SYNRLTRVSAVLAHLMLYSILFCLMLSGYLISTADGQPINVFGWFAIPVTLAGLPDQADTAGTIHLYLAWAVVVLIF

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=155, Percent_Identity=60.6451612903226, Blast_Score=200, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 17711; Mature: 17711

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKNTREQFGYITIAIHWLVALTVYALFALGLWMVTLGYYDGWYHQAPEIHKSVGCILF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH
AVMLFRVIWRFISPPPKPLSSYNRLTRVSAVLAHLMLYSILFCLMLSGYLISTADGQPIN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEE
VFGWFAIPVTLAGLPDQADTAGTIHLYLAWAVVVLIF
EEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLLKNTREQFGYITIAIHWLVALTVYALFALGLWMVTLGYYDGWYHQAPEIHKSVGCILF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH
AVMLFRVIWRFISPPPKPLSSYNRLTRVSAVLAHLMLYSILFCLMLSGYLISTADGQPIN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEE
VFGWFAIPVTLAGLPDQADTAGTIHLYLAWAVVVLIF
EEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]