Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

Click here to switch to the map view.

The map label for this gene is 108811920

Identifier: 108811920

GI number: 108811920

Start: 1983021

End: 1985417

Strand: Reverse

Name: 108811920

Synonym: YPN_1758

Alternate gene names: NA

Gene position: 1985417-1983021 (Counterclockwise)

Preceding gene: 108811921

Following gene: 108811919

Centisome position: 43.78

GC content: 47.39

Gene sequence:

>2397_bases
GTGGCGAAGAGAAAATCTACCGGTACCGGCTGGGTTATCCTACTGATAGTCGCTTTAGGGCTGATGACAGATATCCCAAG
AGAAGCATGGGTTGCACTGAGTTTTGCTATTTTATGCCTGTTTTTTGTTTGGAAAAATATCCGTTGGGCTAAGATTGGTT
CTGGACCGTCCATCAATTCAGACGTACCGGAAGCCTCAGCGATACCCGATCTGGGCGGTTATCAGCTAGACTCTCTGGCC
CTTCATCCTGAACTCGTCATTGATGATGAGCTTACCGATCACCTTGATCAATCTGCTAGTGCTAAACCCTCTTCTGGTGA
TAAACCCTCTGCGAGTACTAAACAGTCAGAAATTTCAAGAGGCTCTCTGGCCCGTGCGTCCTGGCTTCGCCCCGGCGAAT
TAGCCGTGGTTGCCGGGATAACCTTAGCCGATGGCATGATCTACATTGGTAATAAACATAAGAGCAATCGCACCGGAGCA
GAGCCGGCCTTTATCAATCCATCAATGCAGGTCGCCGAAGAAGAGGTAGACATTTCATTGGCGCTGATCGATAACGCCCC
CGATTACTCGACATGTTCCCCGGAGGCGAGAAAAGCGTATTTGCAATGGTTATCGGAAGGTCGTAAATCTCCAATTGCTC
ATATTAGTTATGTTTTCTTATTTTTTTATGGATTAGAGCACCGCGTACTGATTGATGCGAGTATTGATCCAATCGCAAAA
CGAGAGCTGCCCATTATTGAGGCGGAAATTAACCGATTGCTGAATATTTATGGAAAAAATAACACTTTTAATCATTATGC
TCAGAATTTATTAGTTTATATCGCCAGAGTCGATATAGAGGAGACGCTCTATTTATTGCCACCGCCATTAAGCCGAAATG
CCTCAACCGAACTGCCACTTGCTTTGTTGGTTGGCTTAGGGCAATTGGCTGTGGACCAACGGCCATTACCTGCAGAGTGG
GCCTGTGCGTGGGGGGGGGCGGATCCAGCCATTAACCAAAACAGATCATTGATGCATTGTCCTGATGCCTTCTCCCAACT
TTTCCAGCAGCGCTATCGGGATAAATACGGCGATGGCTTTATCCTGCCCGTCAATAAAACCAAACTACATGTTTTCTACC
GTCCTGCTTCCGCAGGATTAATGGGGCAAGAGTTCATCCAGCAGATGGGTGAGTTACCCAACGTGGCAGTATGTAAAGCC
AATAGAGATAAGCTGCGGCCATTAATTGAAGCATGTCAGAACGATCTCGAGGCTTATAACCGCTTTGTGAGTTTGAATCC
TAAGAAAAAAGCAGCATTAGAAGGGCTGTTACTTCTCCCGATGCCGTTGTGGCCAGAGGCATTAAACGCTGAGCTGGAAA
GTATTAAAAGCCGAGTGGGCTATGGCTTACTGTTGATAACATTGGATGAACTTTTTGCCCAACTCAGCCATGCCTGCGCA
TCAAACCCACCAGAACGTTTATCCCGCAATGTGGTCATTGCGCTGACTCAGGCGTTGGCATCCTTGCAGGTTGGTATAGA
GCCTGATGTTCGGGCAGATAATCGTACACCAACCTTGCAAGATACAGTTGCTCTGTTTCCTATTGAGTCCGCGACGGCGG
AGTCGGCAACCTTTGCTGTCTACCGTATCACGATGTTAGCCGTCGAGTTGGCTTGTGCCGCAGTGATGGTTGATGGCCGA
GTTGGGGAACCCGAATCGATGATTTTGACGCGGCATATTGATGCCTGGAGCTACCTTAGCCCTGGTCAACGTATGCGTCT
GAAAGCCTATCTTCAACCGGGGGTCAGGAAGAATAATACGTTGTTGGCCTTGAAAAATAACCTTGAGCCGCTATCGCTTG
AACATCGCCGTGCTATTGCCCGTTTCCTGGCACACCTGATTCAGGTCGAAGGGACCATTACCCCACAAGATGTGAAATTT
CTTGAGCGGGTATATAAGCGTTTTGCCCTAGACAGCAAACTGGTTTATACCGATCTTGATAGCCGTGCGACCCCGATGAC
ATTAAGTTTGCCGCCACCAGGTTCCGTAGCACTAAATAGTGTTGATCGCATTACGCTACTGAAAAATGAAAGTCAGGAAT
TGGTGGCGCTGTTGGAGAATTTATTTCTAACCAAAGTGGTGGCGACAGAGGATAAAGAAGAGATTGATCCACAATCAATG
GCGGCAATAATGGCTGATATGCAGGAAGGAACCGTGACGCTCCTACGATTACTGATTTCACGCAATGCATGGGAGCGTGA
TAAATTAACCGATATCGCGCTGGACATGGAAATCAGACTGGACGATATACTGATTGAGATTAATCGCAAGATATTGGCTG
TTTTTGACGTACCGCTGATTACTGGCGATGCGGTTATTTCAATTAATCGTGATGTCTCGGCTGCATTATTGGCCTGA

Upstream 100 bases:

>100_bases
CTGTTTTAAAAAAGTTTTGTTTAAAAGAACTATTTATTAAAAATTGCCAGTAAAGGCAGAATAAAAATTACTATTTTAAG
ATAGGGGCAGATAAACCATC

Downstream 100 bases:

>100_bases
TAAGCAGACAGTTGATTAATAAATATAGGCTCAATAAACATAGTCTTAATAAACATCGGCAGCGTAACTTGAGCTCAAAC
GCAATAATCGCTACCATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 798; Mature: 797

Protein sequence:

>798_residues
MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPEASAIPDLGGYQLDSLA
LHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGA
EPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK
RELPIIEAEINRLLNIYGKNNTFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEW
ACAWGGADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKA
NRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA
SNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGR
VGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKF
LERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM
AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA

Sequences:

>Translated_798_residues
MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPEASAIPDLGGYQLDSLA
LHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGA
EPAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK
RELPIIEAEINRLLNIYGKNNTFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEW
ACAWGGADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKA
NRDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA
SNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGR
VGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKF
LERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM
AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA
>Mature_797_residues
AKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINSDVPEASAIPDLGGYQLDSLAL
HPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISRGSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAE
PAFINPSMQVAEEEVDISLALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAKR
ELPIIEAEINRLLNIYGKNNTFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPLALLVGLGQLAVDQRPLPAEWA
CAWGGADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGFILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKAN
RDKLRPLIEACQNDLEAYNRFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACAS
NPPERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAVYRITMLAVELACAAVMVDGRV
GEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNTLLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFL
ERVYKRFALDSKLVYTDLDSRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSMA
AIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLITGDAVISINRDVSAALLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88201; Mature: 88070

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINS
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
DVPEASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISR
CCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHC
GSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISL
CCHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEE
ALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH
RELPIIEAEINRLLNIYGKNNTFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPL
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECHHHEEEEECCCCCCCCCCCCCH
ALLVGLGQLAVDQRPLPAEWACAWGGADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGF
HHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEE
ILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLEAYN
EEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
RFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA
HHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHC
SNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAV
CCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCHHHHH
YRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNT
HHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCE
LLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLD
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
SRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM
CCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH
AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLI
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEHHHHHHHHCCEEEEEEECCEE
TGDAVISINRDVSAALLA
CCCEEEEECCCCHHHHCC
>Mature Secondary Structure 
AKRKSTGTGWVILLIVALGLMTDIPREAWVALSFAILCLFFVWKNIRWAKIGSGPSINS
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
DVPEASAIPDLGGYQLDSLALHPELVIDDELTDHLDQSASAKPSSGDKPSASTKQSEISR
CCCCCCCCCCCCCCCCCCEEECCCEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHC
GSLARASWLRPGELAVVAGITLADGMIYIGNKHKSNRTGAEPAFINPSMQVAEEEVDISL
CCHHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHCCEEE
ALIDNAPDYSTCSPEARKAYLQWLSEGRKSPIAHISYVFLFFYGLEHRVLIDASIDPIAK
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH
RELPIIEAEINRLLNIYGKNNTFNHYAQNLLVYIARVDIEETLYLLPPPLSRNASTELPL
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECHHHEEEEECCCCCCCCCCCCCH
ALLVGLGQLAVDQRPLPAEWACAWGGADPAINQNRSLMHCPDAFSQLFQQRYRDKYGDGF
HHHHCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEE
ILPVNKTKLHVFYRPASAGLMGQEFIQQMGELPNVAVCKANRDKLRPLIEACQNDLEAYN
EEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
RFVSLNPKKKAALEGLLLLPMPLWPEALNAELESIKSRVGYGLLLITLDELFAQLSHACA
HHCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHC
SNPPERLSRNVVIALTQALASLQVGIEPDVRADNRTPTLQDTVALFPIESATAESATFAV
CCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCHHHHH
YRITMLAVELACAAVMVDGRVGEPESMILTRHIDAWSYLSPGQRMRLKAYLQPGVRKNNT
HHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCHHEEHHEECCCCCCCCCE
LLALKNNLEPLSLEHRRAIARFLAHLIQVEGTITPQDVKFLERVYKRFALDSKLVYTDLD
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC
SRATPMTLSLPPPGSVALNSVDRITLLKNESQELVALLENLFLTKVVATEDKEEIDPQSM
CCCCCEEEECCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH
AAIMADMQEGTVTLLRLLISRNAWERDKLTDIALDMEIRLDDILIEINRKILAVFDVPLI
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEHHHHHHHHCCEEEEEEECCEE
TGDAVISINRDVSAALLA
CCCEEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA