Click here to switch to the map view.

The map label for this gene is 108811602

Identifier: 108811602

GI number: 108811602

Start: 1639336

End: 1640058

Strand: Reverse

Name: 108811602

Synonym: YPN_1439

Alternate gene names: NA

Gene position: 1640058-1639336 (Counterclockwise)

Preceding gene: 108811614

Following gene: 108811601

Centisome position: 36.17

GC content: 49.52

Gene sequence:

>723_bases
ATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCGACCTTAATGCATTTTC
TCGTATGCTAACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCC
CTAAATCAGGCTCGAATACCCGCAACGGCTATTCGTCCAAAACACTGCTATGCGACGACGGCGAAATCGAGCTGAATACG
CCACGCGACCGCGAAAACACCTTTGAACCGCAGCTGATAAAGAAAAATCAGACGCGTATCACACAGATGGACAGCCAGAT
TTTGTCCCTGTACGCCAAAGGCATGACCACCCGCGAAATCGTCGCCACCTTCAAAGAGATGTATGACGCCGATGTGTCTC
CCACGCTGATATCTAAAGTCACCGATGCCGTAAAAGAGCAGGTTGCTGAATGGCAAAACCGCCAACTGGATGCTCTGTAT
CCCATTGTTTATATGGACTGCATTGTCGTAAAAGTCCGCCAGAACGGTAGCGTGATAAACAAAGCAGTGTTCCTAGCGCT
GGGCATCAACACTGAAGGTCAGAAAGAGCTGCTGGGCATGTGGCTGGCAGAAAATGAAGGTGCGAAGTTCTGGCTAAGTG
TGCTGACAGAGCTAAAAAATCGCGGTCTTCAGGACATTCTGATTGCCTGCGTGGATGGCCTGAAGGGGTCCCGGATGCGA
TAA

Upstream 100 bases:

>100_bases
TCCCATTACTGTTCCCATAACGATCCAGAGAGACTGTAAACAATATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCA
ACAACGGAGACAGGCAAATT

Downstream 100 bases:

>100_bases
ACAGTGTTTATCCGCAGACTCACATCCAGCTGTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAG
GACTATAAAGCCGTCACCAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNT
PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY
PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGSRMR

Sequences:

>Translated_240_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNT
PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY
PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGSRMR
>Mature_240_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNT
PRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALY
PIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGSRMR

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 26870; Mature: 26870

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNT
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREI
CCCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH
VATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHH
KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGSRMR
HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNT
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREI
CCCCCCCEEEECCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH
VATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHH
KAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGSRMR
HHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]