| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108811480
Identifier: 108811480
GI number: 108811480
Start: 1501299
End: 1501472
Strand: Reverse
Name: 108811480
Synonym: YPN_1317
Alternate gene names: NA
Gene position: 1501472-1501299 (Counterclockwise)
Preceding gene: 108811484
Following gene: 108811478
Centisome position: 33.11
GC content: 48.28
Gene sequence:
>174_bases ATGACGGTTTGCGGTGTACCACTAACGTTGGATGTTCATTGGCCAGTAAAGGTGGGCGACTTCATCGCGGATAACCTCGA AATAGATGGCAGCATCGACCTTGTGAACCAGATGATGTTACGGCGACAGCTCTTCAAGGGTGACCATTTCGAGTTGATAT TGTTGCAGAGTTGA
Upstream 100 bases:
>100_bases GGTACCGGCGCTCACAATCAGTCGCTTAAATACTGACATACCGGTCAACTCAGTATTTATTCGTCGGTTCCCGCCATCTG GCTCCAAATATTGTGGATTA
Downstream 100 bases:
>100_bases TATTGTTGCAGAGCAGATTTTTTTTAGCCTGTTTCTATGAGTTCAAAGTCCCGACCAAGAAGCCAGGACTTTGTTATCAA CGTATTTATTAATCCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MTVCGVPLTLDVHWPVKVGDFIADNLEIDGSIDLVNQMMLRRQLFKGDHFELILLQS
Sequences:
>Translated_57_residues MTVCGVPLTLDVHWPVKVGDFIADNLEIDGSIDLVNQMMLRRQLFKGDHFELILLQS >Mature_56_residues TVCGVPLTLDVHWPVKVGDFIADNLEIDGSIDLVNQMMLRRQLFKGDHFELILLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6483; Mature: 6352
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVCGVPLTLDVHWPVKVGDFIADNLEIDGSIDLVNQMMLRRQLFKGDHFELILLQS CEECCCCEEEEEECCCEECCEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure TVCGVPLTLDVHWPVKVGDFIADNLEIDGSIDLVNQMMLRRQLFKGDHFELILLQS EECCCCEEEEEECCCEECCEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA