Click here to switch to the map view.

The map label for this gene is ygaH [H]

Identifier: 108810996

GI number: 108810996

Start: 970281

End: 970622

Strand: Reverse

Name: ygaH [H]

Synonym: YPN_0831

Alternate gene names: 108810996

Gene position: 970622-970281 (Counterclockwise)

Preceding gene: 108810997

Following gene: 108810995

Centisome position: 21.4

GC content: 44.15

Gene sequence:

>342_bases
ATGAATACAGATATACTGATGATCGGTCTGGTGGTGGGAACGGTGAATTACTTGTTTCGCTACTTACCTCTGCGCTTCGG
GCCAGCACGTAAGCAAACTGGCCTACTGCGGGGCAAAATGTCTCTGCTGCTGGACAGCATTGGCATCGCCTCAATCTGTG
CATTATTGGTGGTTTCCAGTACCCCAGAGATTATTCATCACCCACAGAAATTACTCCCTACATTAATTGGTTTTTTAGTG
ATCTGCGGATGCTTTTATAAAACCAACAGTATTATCTTCGCTACGCTACTTGGCGCGCTCTGTTACGGTTTGACATTCAA
ATTACTAACGATTTTAGGATAA

Upstream 100 bases:

>100_bases
TTTTGGCCGGGATTGCGGGTGGTTGTCTCGCGACTTTGCTTCAGCCCACCGCCTCTGTCGTGGCCAAACACCGTGAGGAT
CACGAGCAGGAGCCAACACC

Downstream 100 bases:

>100_bases
TAAGTTGCTTAATCTGTGAACTAAAGCACAATAACCATACTGTTAGTAATGCCAATGGCCGATTCACCTTGGCTGAATAA
CACTAATTGCTAAATTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLDSIGIASICALLVVSSTPEIIHHPQKLLPTLIGFLV
ICGCFYKTNSIIFATLLGALCYGLTFKLLTILG

Sequences:

>Translated_113_residues
MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLDSIGIASICALLVVSSTPEIIHHPQKLLPTLIGFLV
ICGCFYKTNSIIFATLLGALCYGLTFKLLTILG
>Mature_113_residues
MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLDSIGIASICALLVVSSTPEIIHHPQKLLPTLIGFLV
ICGCFYKTNSIIFATLLGALCYGLTFKLLTILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789039, Length=99, Percent_Identity=56.5656565656566, Blast_Score=108, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008407 [H]

Pfam domain/function: PF05437 AzlD [H]

EC number: NA

Molecular weight: Translated: 12314; Mature: 12314

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLDSIGIASICALLVVSS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TPEIIHHPQKLLPTLIGFLVICGCFYKTNSIIFATLLGALCYGLTFKLLTILG
CHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLDSIGIASICALLVVSS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TPEIIHHPQKLLPTLIGFLVICGCFYKTNSIIFATLLGALCYGLTFKLLTILG
CHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7730261 [H]